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scnpilot_p_inoc_scaffold_5016_curated_8

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 6837..7520

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UX42_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 206.0
  • Bit_score: 203
  • Evalue 2.90e-49
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 206.0
  • Bit_score: 203
  • Evalue 9.20e-50
TetR family transcriptional regulator {ECO:0000313|EMBL:ADU37678.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 206.0
  • Bit_score: 203
  • Evalue 4.10e-49

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGACACGACCTCCCCCGCCCGCGCCGGACAAGGCCCCTCCCGCCGCGCCGCGCGCGCGCCGCCGCGACAAGGAACTGCAGGCGCGCCGGCGCGACCTGCTGGCCGCCGCGCGCAAGCTGCTGCGCAAGGGCGGCGCGCAGGCGGTGACGATGCGCACCGTGGCCGATCTGGTGGGGGTCTCCACCACGGTGGTGTACGCGCTCTTTCCCGACAAGGCGGCGCTGATCGCGCAGGCCGTGGACGACGACCTCAAGCGCTTCTCGCGCCACCTGCAGCAGGCGCTGGCGCAGGCCAGCGACGCGCGCGACGCGCTGCGCCAGGTGGCGCGCGCGTACGCTGCCTTCGGCGTGGCGCACCCGCAGGCCTACCGGCTGATGTTCATGGAAGCCCGGCCCGCCTCGCCGGTGGAGGATTCATCGATCGAATTCGGCAACCCGAGCGAGGACGCCTACGCTCTGGCGCGCACGCTGGCCGATGGCCTGCTGCGCGAGGCGGGCGGCCCGCCGCCCGCACAGGCCGACATCGACACCACAGCCCAGCTGGTGTGGGAGGCGCTGCACGGCGTGACCTCGCTGCGCATCACGCTGGGCGACGACCCGTGGTTCGCGCGCCTGCCGCTGGAGCAGCACATCGACCGCATGGTGGACATCTTCGCGGCGGGGGTGCAGGGCCGCAGCCGTTGA
PROTEIN sequence
Length: 228
MTRPPPPAPDKAPPAAPRARRRDKELQARRRDLLAAARKLLRKGGAQAVTMRTVADLVGVSTTVVYALFPDKAALIAQAVDDDLKRFSRHLQQALAQASDARDALRQVARAYAAFGVAHPQAYRLMFMEARPASPVEDSSIEFGNPSEDAYALARTLADGLLREAGGPPPAQADIDTTAQLVWEALHGVTSLRITLGDDPWFARLPLEQHIDRMVDIFAAGVQGRSR*