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scnpilot_p_inoc_scaffold_8675_curated_1

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(242..541)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein {ECO:0000313|EMBL:EXU81545.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 97.0
  • Bit_score: 178
  • Evalue 4.80e-42
RNP-1 like RNA-binding protein id=12550681 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 98.0
  • Bit_score: 175
  • Evalue 2.20e-41
RNP-1-like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 98.0
  • Bit_score: 173
  • Evalue 4.50e-41

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Taxonomy

Comamonas aquatica → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGGGCAACAAACTGTACGTGGGCAACCTGCCCTATTCCTTCCGCGACGGCGATCTCGAGCAAACCTTCGGCGCCTTCGGCGCGGTGCAAAGCGCTAAAGTCATGATGGAGCGCGACACCGGCCGTTCCAAGGGCTTTGGCTTCGTCGAAATGGGCAGCGCCGCCGAGGCGCAAGCCGCGATTGCCGGCGTGCACGGTCAGCAGTTTGGCGGCCGCGATCTGGTGGTCAATATCGCCCGCCCCATGGAGCCGCGCCCGCCCCGCGCTGGCGGCTACGGCGGCGGCCGCGGCGCCTATTGA
PROTEIN sequence
Length: 100
MGNKLYVGNLPYSFRDGDLEQTFGAFGAVQSAKVMMERDTGRSKGFGFVEMGSAAEAQAAIAGVHGQQFGGRDLVVNIARPMEPRPPRAGGYGGGRGAY*