ggKbase home page

scnpilot_p_inoc_scaffold_1865_curated_3

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(1892..2596)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 225.0
  • Bit_score: 284
  • Evalue 3.30e-74
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F7DA3 similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 216.0
  • Bit_score: 311
  • Evalue 7.90e-82
Pseudouridylate synthases, 23S RNA-specific {ECO:0000313|EMBL:GAD24176.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 216.0
  • Bit_score: 311
  • Evalue 1.10e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGACGCGCCCTGACCCGGCCGATGGGCCGCCGCCCGGCGGCGTCGCCTGCCTGTACCAGGACGACGACCTGCTGGTGCTGGCCAAGCCCCCCGGCCTGCTGTGCGTGCCCGGACGCGGCCCGGACAAGCAGGACTGCCTGAGCGCCCGCGCCCAGGCGCGCTGGCCCGGCGCCCTGGTGGTGCACCGGCTCGACCAGGCCACCTCGGGCCTGGTGCTCATGGCGCGCCACCCCGAGGCCCAGCGCCGCCTGGGCGACGCCTTCGCCCAGCGGCGCGTGGACAAGCGCTACCAGGCCGTGGTGCGCGGCCTGCCCCGGCCGGATGCCGGTGCCATAAGCGCCGGCGGCTGGAGCCTGATCGACCTGCCGCTGATCGCCGACTGGCCCAACCGCCCCCTGCAGAAAGTGGACCGGGAACACGGCAAACCCAGCCAGACGCGCTGGCGCAGCGTGCGCCACGACGCAGCGCGCGGTGTCACGCTGCTCGACCTGGAGCCGCTCACCGGCCGCTCGCACCAGCTGCGCCTGCACCTGGCCAGCATCGGCCACCCCATCCTGGGCGACACGCTGTACGCCGACGCCGCCACGCAGGCCATGGCGCCGCGGTTGCTGCTGCATGCCTGCGCGCTGGCCTTTGCCCACCCCATGGGCGGCCAGGACTGCCGCTTCGCGCTGCCGCCGGATTTTGGCGAAACAGGCCTCTAG
PROTEIN sequence
Length: 235
MTRPDPADGPPPGGVACLYQDDDLLVLAKPPGLLCVPGRGPDKQDCLSARAQARWPGALVVHRLDQATSGLVLMARHPEAQRRLGDAFAQRRVDKRYQAVVRGLPRPDAGAISAGGWSLIDLPLIADWPNRPLQKVDREHGKPSQTRWRSVRHDAARGVTLLDLEPLTGRSHQLRLHLASIGHPILGDTLYADAATQAMAPRLLLHACALAFAHPMGGQDCRFALPPDFGETGL*