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scnpilot_p_inoc_scaffold_1865_curated_28

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(25675..26100)

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein ExbD/TolR n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TQA0_ACIAC similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 141.0
  • Bit_score: 240
  • Evalue 7.90e-61
uncharacterized LOC100486403 similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 141.0
  • Bit_score: 257
  • Evalue 2.60e-66
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ABM33138.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 141.0
  • Bit_score: 240
  • Evalue 1.10e-60

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Taxonomy

Acidovorax citrulli → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
ATGAACTTCCGCCCCCGCCCCAAGGATGAGCCGGAGATCAACCTGATCCCGTTCATCGACGTGCTGCTGGTGGTCCTCATCTTCCTGATGCTCACCACCACGTACAGCAAGTTCACCGAGCTGCAGCTCACGCTGCCCGTGGCCGACGCCGAGCAGCAGCGCGACTACCCCAAGGAAATCGTCGTGGCCGTGGCCGCCGACGGGCGCTACGCCGTCAACAAGGCAGCGGTGGAAGGCGGCGGCGTCGAGTCCATGGCGCGCGTGCTGGGCGATGCCGCCAAGGCCGGGCCGGACAGCGTCGTCATCATCAGCGCCGACGCGCAGGCGCCGCACCAGGCCGTGATCACGGTGATGGAAGCCGCGCGCCGCGCCGGGCTGTCGCGCATCACCTTCGCCACCCAATCCTCGGCCAGCGCCGGACGCTAA
PROTEIN sequence
Length: 142
MNFRPRPKDEPEINLIPFIDVLLVVLIFLMLTTTYSKFTELQLTLPVADAEQQRDYPKEIVVAVAADGRYAVNKAAVEGGGVESMARVLGDAAKAGPDSVVIISADAQAPHQAVITVMEAARRAGLSRITFATQSSASAGR*