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scnpilot_p_inoc_scaffold_2144_curated_12

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(11796..15080)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 999.99
  • Bit_score: 2003
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 999.99
  • Bit_score: 2003
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=RPOC_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 999.99
  • Bit_score: 2003
  • Evalue 0.0
  • rbh

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Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3285
GCGAACAAGCGCGCGCTCAAGTCCCTGGCCGACATGATCAAGGGCAAGAGCGGCCGCTTCCGCCAGAACCTGCTGGGCAAGCGCGTCGATTACTCCGGCCGTTCGGTGATCACCGTGGGCCCGACGCTGAAGCTGCACCAGTGCGGCCTGCCCAAGCTGATGGCGCTGGAGCTGTTCAAGCCCTTCATCTTCTCGCGCCTCGAAGCCATGGGCATCGCCACGACGATCAAGGCCGCGAAGAAGGAAGTGGAAGCCGGCACGCCGGTGGTGTGGGACATCCTGGAAGAGGTCATCAAGGAGCACCCGGTGCTGCTGAACCGCGCGCCCACGCTGCACCGCCTGGGCATCCAGGCGTTCGAGCCCATCCTGATCGAAGGCAAGGCCATCCAGCTGCACCCGCTGGTGTGCGCGGCGTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTGCACGTCCCCCTGTCGGTGGAAGCGCAGATGGAAGCCCGCACGCTGATGCTGGCCTCCAACAACGTGCTGTTCCCGGCCTCGGGCGAGCCGTCCATCGTGCCCTCGCAGGACGTGGTGCTGGGCCTGTACCACGCCACGCGCGACAAGATCAACGGCAAGGGCGAGGGCCTGGTGTTCGCCGACACCGGCGAAGTCCAGCGCGCACTCGACGCGGGCGAGGCCGAGCTGCACGCCAAGATCAGCGTGCGCCTGACCGAGTGGACCCGCGACAAGGCCACGGGCGAATTCGTGCCCGAGACCAAGCTCGTGGACACCACCGTGGGCCGCGCGCTGCTGAGCGAGATCCTGCCCCGCGGCCTGCCCTTCAGCAACCTGAACAAGGCGCTGAAGAAGAAGGAAATCTCCAAGCTCATCAACGCCAGCTTCCGCAAGTGCGGCCTGAAGGAAACCGTGGTGTTCGCCGACAAGCTGCTGCAGAACGGCTTCCGCCTGGCGACGCACGCCGGCTTCTCGGTGGCCATCGACGACATGCTGGTGCCGCCGCAGAAGGCCGACATCCTGGCCCGCGCCGAGGCCGAGGTGAAGGAGATCGAGCAGCAGTACGTCTCCGGCCTGGTCACGTCGGGCGAGCGCTACAACAAGGTCGTGGACATCTGGGGCAAGGCCGGCGACGACGTGTCCAAGGTGATGATGGACCAGCTCAAGGTGCAGAAGACCATCGACCGCCACGGCAACGAAGTCAACCAGGAGTCGTTCAACGCCATCTACATGATGGCCGACTCGGGCGCGCGGGGTTCTGCCGCCCAGATCCGCCAGCTCGCCGGCATGCGCGGCCTGATGGCCAAGCCGGACGGCTCGATCATTGAAACGCCTATCACCGCGAACTTCCGCGAAGGCCTGAACGTGCTGCAGTACTTCATCTCCACCCACGGCGCCCGCAAGGGCCTGGCGGATACGGCGCTGAAGACCGCGAACTCGGGCTACCTCACGCGCCGCCTGGTGGACGTGACGCAGGACCTGGTGGTGAACCAGGAAGACTGCGGCACCAGCAACGGCTCGCTGATGCGCGCCATCGTCGAGGGCGGCGAGGTGATCGAGTCGCTGCGCGACCGCATCCTGGGCCGCACCACGGCAGAGGAAGTGCTGCACCCCGAAACCCGCGCCGTGCTCGCTCCGGCGGGCCGCATGCTCGATGAAGACCTCATTGAGGAGCTGGAAGCCGTGGGTGTGGACGAGGTCAAGGTGCGCACCGCGCTGACCTGCGAAACCCGCTTCGGCCTGTGCGCCAAGTGCTACGGCCGCGACCTGGGCCGCGGCGGCCTGATCAACCTCGGCGAAGCCGTGGGCGTGATCGCCGCGCAGTCCATCGGCGAACCCGGCACGCAGCTGACCATGCGCACGTTCCACATCGGCGGCGCCGCTTCGCGCGCCGCCATCGCGTCGAGCGTGGAAGCCAAGTCGAACGGCCTGGTCGCCTTCAACGCCACGATGCGCTACGTCAGCAACACCAAGGGCGAGCTGGTGGTGATCGCGCGTTCCGGCGAGATCATCATCCAGGACGACCATGGCCGCGAGCGCGAGCGCCACAAGGTGCCGTACGGCGCGGTGCTGACCGTCAAGCCCGACGAAGCCATCAAGGCCGGCAAGATCCTGGCCAACTGGGACCCGCTGACGCGCCCGATCATCACGGAATTTGCCGGCCAGGTGAAGTTCGAGAACATCGAGGAAGGCCTCACCGTGGCCAAGCAGGTGGACGACGTGACCGGCCTGTCCACGCTGGTGGTGATCGACCCCAAGCGCCGCGGCTCCGCCAAGGTGGTGCGCCCGCTGGTCAAGCTGGTGGACGCGAACGGCCAGGAGGTGAAGATCCCCGGCACCGACCACTCGGTGGCCATCGGCTTCCAGGTGGGCGCGCTGATCCAGGTGCGCGACGGCCAGGACGTGGGCCCCGGCGAAGTGCTGGCGCGCATTCCGGTCGAAGGCCAGAAGACGCGCGACATCACCGGCGGTCTGCCGCGCGTGGCAGAGCTGTTCGAGGCCCGCACGCCCAAGGACAAGGGCACGCTGGCCGAGATGACCGGCACCATCTCCTTCGGCAAGGAAACCAAGGGCAAGGTGCGCCTGCAGATCACCGACCCGGACGGCAAGGTGTGGGAAGAGCTGATCCCCAAGGAAAAGAACATCCTGGTGCACGAAGGCCAGGTGGTCAACAAGGGCGAGCACATCGTGGACGGCCCGGCCGATCCGCAGGACATCCTGCGCCTGCTGGGCATCGAGGAACTCTCGCGCTACATCGTCGATGAAGTGCAGGACGTGTACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTGCGCCAGATGCTGCGCCGCGTCGTGGTCGAGAACCCGGGCGAGTCCAGCTACATCGGCGGCGAGCAGGTCGAGCGCAGCGAGATCCTCAACACCAACGAGGCGCTGCAGGCCGAGGGCAAGATTCCCGCCACGTACTCCAACGTGCTGCTGGGCATCACCAAGGCGTCGCTGTCCACCGACTCGTTCATCTCCGCCGCGTCGTTCCAGGAAACCACGCGCGTGCTCACCGAGGCGGCCATCATGGGCAAGCGCGACGAGCTGCGCGGCCTGAAGGAAAACGTCATCGTGGGCCGCCTGATCCCGGCTGGCACGGGCCTGGCCTACCACCAGGCGCGCAAGGTCAAGGATGCCATGGACGACGCCGAGCGCCGCGCCATCGCCGAGGCCGAAGCCGCCGAGATGGCTGCCGTCACCGAAGGCGCCGATGAGCCCGAGGTGAACGCCCACGCGGGCGACGCCGCCGACTAA
PROTEIN sequence
Length: 1095
ANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPTLKLHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQMEARTLMLASNNVLFPASGEPSIVPSQDVVLGLYHATRDKINGKGEGLVFADTGEVQRALDAGEAELHAKISVRLTEWTRDKATGEFVPETKLVDTTVGRALLSEILPRGLPFSNLNKALKKKEISKLINASFRKCGLKETVVFADKLLQNGFRLATHAGFSVAIDDMLVPPQKADILARAEAEVKEIEQQYVSGLVTSGERYNKVVDIWGKAGDDVSKVMMDQLKVQKTIDRHGNEVNQESFNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVNQEDCGTSNGSLMRAIVEGGEVIESLRDRILGRTTAEEVLHPETRAVLAPAGRMLDEDLIEELEAVGVDEVKVRTALTCETRFGLCAKCYGRDLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAIASSVEAKSNGLVAFNATMRYVSNTKGELVVIARSGEIIIQDDHGRERERHKVPYGAVLTVKPDEAIKAGKILANWDPLTRPIITEFAGQVKFENIEEGLTVAKQVDDVTGLSTLVVIDPKRRGSAKVVRPLVKLVDANGQEVKIPGTDHSVAIGFQVGALIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRVAELFEARTPKDKGTLAEMTGTISFGKETKGKVRLQITDPDGKVWEELIPKEKNILVHEGQVVNKGEHIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVVVENPGESSYIGGEQVERSEILNTNEALQAEGKIPATYSNVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKVKDAMDDAERRAIAEAEAAEMAAVTEGADEPEVNAHAGDAAD*