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scnpilot_p_inoc_scaffold_5133_curated_4

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(3231..4421)

Top 3 Functional Annotations

Value Algorithm Source
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:EXI67644.1}; Flags: Precursor;; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.5
  • Coverage: 381.0
  • Bit_score: 174
  • Evalue 3.60e-40
extracellular ligand-binding receptor id=5080365 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 30.6
  • Coverage: 386.0
  • Bit_score: 160
  • Evalue 3.80e-36
branched-chain amino acid ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 29.9
  • Coverage: 394.0
  • Bit_score: 159
  • Evalue 2.00e-36

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Taxonomy

Candidatus Accumulibacter sp. SK-12 → Candidatus Accumulibacter → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1191
ATGACAGGCATCCTGCTTCGTGTCCCGCCCGCTCGCCCCTGGGCCGCGCGGTTTTTCTGCGCTGTTCTCGCATTCGCGGCAGCCTGCCTTGCGCCTGCCCGCGCATTGGCCCAGGACAAGAGCGCCATCACCATCGCCCAGGTGGCCCCGTTCAGCGGCCCCATGGCCTTTTACGCCCAGTCCTTGCACGAGGGGATGCAGGCCTATTTCGGCTGGATCAACCAGCAGGGCGGGGTGCGGGGGCGGCGCGTGGAGCTGCTGGCCGTGGATACCCCGCTCGACCCCGAGCGGACGCTGCAAGCCTACGCCCAGGCCGCAATGCTCCACAACCCGGTGGCGTTCGTGTACCCCCTGTCGCCGACGGTGATCGACGCACTGATGGACGCGAAGATCGCCCGCCGCCTGGGGATCCCCATCGTCGGCACCGTGCCCCAGATGTACCGCCGCCGCCACCCCGTGGACCCGGACCTGTTCTTCGTGGGCGTGAGCGATGCCAGGGAGGTCCGGAAGATCGTCGAGCACATCGCCACGCTGGGCATGCGCAGGATCGCCGTCGTCCACTGGAACGATGCGACCACCACGGGGCTGGTGGACATCATCCGGCGGGAGGCCGCGTCGCGCGGCGTCGCGGTCGTGCGGGAGTTCCCCATCCTGCCCGACGGCCGGGGCGACTTGGCCGGTGCGATCGAGGGACTGGACAAGGAGGGGCGCAGCGCCTCGGCGGTCATCAGCCTGCTGGCGGCCCCCGAGACGGCCAAGCTCGTCTCGGACCTGCGCGCCAGGGGCAACCGGATGGCGGTCTATGGGCCTTCGTACAACGACGCGAGCCTGATCAGCCGGCATGCCGAGAACGGCAGCCACCATGGCATGAGCATCTCGCAGACCGTGCCCAACCCGGACAGCCTCATGCTGCCGCTCGCCATCGACTTCCGAAAACATTTTGCCGAGCACGTGCCGCGATCCGGGTTCAACAGCCTGTCGTTCCAGGGGTACATCGCGGCGCGGCTGATCGTCCAGGCCCTGTTGCGCTGCCCGGACCCGAAAAGCGCTGCATGCCTGCGCCAGGAACTCGAAAACACCCGGCCGCATGACCTGGGGGGCCTGACGGCGGGGTACTCCGCCAGCAACCACGATGGCCTGTCCTACGTGGACATTGGCGTGATCTCGCGCAGCGGCAAGCTGATCCGCTGA
PROTEIN sequence
Length: 397
MTGILLRVPPARPWAARFFCAVLAFAAACLAPARALAQDKSAITIAQVAPFSGPMAFYAQSLHEGMQAYFGWINQQGGVRGRRVELLAVDTPLDPERTLQAYAQAAMLHNPVAFVYPLSPTVIDALMDAKIARRLGIPIVGTVPQMYRRRHPVDPDLFFVGVSDAREVRKIVEHIATLGMRRIAVVHWNDATTTGLVDIIRREAASRGVAVVREFPILPDGRGDLAGAIEGLDKEGRSASAVISLLAAPETAKLVSDLRARGNRMAVYGPSYNDASLISRHAENGSHHGMSISQTVPNPDSLMLPLAIDFRKHFAEHVPRSGFNSLSFQGYIAARLIVQALLRCPDPKSAACLRQELENTRPHDLGGLTAGYSASNHDGLSYVDIGVISRSGKLIR*