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scnpilot_p_inoc_scaffold_3381_curated_7

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(6028..8406)

Top 3 Functional Annotations

Value Algorithm Source
RNA binding S1 domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6M2_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 799.0
  • Bit_score: 1448
  • Evalue 0.0
protein tex-like similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 792.0
  • Bit_score: 1457
  • Evalue 0.0
RNA binding S1 domain protein {ECO:0000313|EMBL:ABM41897.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 799.0
  • Bit_score: 1448
  • Evalue 0.0

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2379
ATGCAGCAAATCGTCCGGCAGTTGGCCGCAGAAATCAAGATTACCGAATCCCAGGTGCGCTCCGCCGTGGAGCTGCTCGACGGCGGGGCCACCGTGCCCTTCATCGCGCGCTACCGCAAGGAGGTGACCGGCGGCCTGGACGATGTGCAGCTGCGCGAGCTGGAGGCGCGCCTGGCCTACCTGCGCGAGCTGGAAGAGCGCCGCGTGAGCGTGCTCAAGGCGATCGACGAGCAGGGCAAGCTGACCGATGCCCTGCGCGCGCAGATCGCCGCCGCGCCGACCAAGCAGGAGCTGGAGGACATCTACCTGCCCTTCAAGCAAAAGCGCCGCACCAAGGGCCAGATCGCGCGCGAATTTGGCATCGAGCCGCTGGCCGACAAGCTGCTGGCCGATCCGGCGCTGGATCCGCACGCCGAGGCACAGGCCTTCTGCCAGCCCGCCACCACGCTCGACGACGGCAAGCCGGGGCCGGATTTCTCGACCACCTTCGCCGTGCTCGACGGCGTGCGCGACATCCTCTCCGAGCGCTGGGCCGAGGACGCCGTGCTGGTGCAGTCGCTGCGCGAATGGCTGTGGGCCGAGGGGCTGCTGCGCTCCAAGAAGGTCGAGGGCAAGAACGAGAACGACCCCGAGGTGGCCAAGTTCCGCGACTACTTCGAGTACGACGAACCGATTGGCCGCGTGCCCTCGCACCGTGCGCTGGCGGTGTTCCGCGGCCGCGCGCTGGAGATTCTGGAAGCCAAGCTGGTGCTGCCCGTGGAGCCCGAGCCGGGCCAGCCCAGCATCGCCGAAGGCCGCATCGCCCTGCACCTGGGCTGGAGCCACGCGGGCCGCAAGAGCGACGACCTGCTGCGCAAGTGCGTGGCCTGGACCTGGCGCGTGAAGCTCAGCCTCTCGACCGAACGCGACCTGTTCTCGCGCCTGCGCGAAGAGGCCGAGAAGGTGGCCATCAAGGTCTTCGCCGACAACCTGCGCGACCTGCTGCTGGCCGCACCCGCCGGCCCGCGCGCCGTGATGGGGCTGGACCCAGGCATCCGCACCGGCGTCAAGGTGGCCGTGGTGGACCGCACCGGCAAGCTGGTGGAGACCGCCACCGTCTACCCGCACGAGCCGCGCCGCGACTGGGACGGCAGCTTGGCCGTGCTGGGCCGCCTGTGCATGAAGCATGGCGTGCAGCTCATCGCCATCGGCAACGGCACGGCCAGCCGCGAGACCGACAAGCTCGCTGCCGACCTCATCAAATTGATGCAAAAACAGGCCTCGGACCCTGCGGGGCAAGCGCTGCCAGCTATTGAAAAGATAGTGGTGAGCGAGGCCGGCGCCTCGGTCTACAGCGCCAGCGAATACGCCTCGCAGGAAATGCCCGACGTGGACGTGAGCCTGCGCGGCGCCGCCAGCATCGCGCGCCGCCTGCAGGACCCGCTGGCCGAGCTGGTGAAGATCGAGCCCAAGAGCATCGGCGTCGGCCAGTACCAGCACGACGTGAACCAGAGCGAGCTGGCGCGCACGCTGGATGCCGTGGTCGAGGACTGCGTGAACTCCGTCGGCGTTGACCTGAACACCGCCAGCGTGCCGCTGCTGTCGCGGGTGTCGGGCCTGTCGGGCAGCGTGGCCAAGTCGGTGGTGCGCTGGCGCGAGTCCAACGGCGCGTTCAGGAGCCGCAAGCAGCTCATGGAAGTCAGCGGCCTGGGCGCCAAGACCTTCGAGCAGGCGGCGGGCTTCCTGCGCATCCGCGACGGCGAGAACCCGCTGGACATGACCGGCGTGCACCCCGAGACCTACCCCGTGGTGCAGCAGATCATCGAGAAGACCGGCAAGCCCGTGGCCGAGCTGATGGGCCGCGCCGACATGCTCAAGACCCTGCGCCCCGAGCTGTTTGCCAGCGAGAAATTCGGCCCCATCACGGTGAAGGACATCCTGGCCGAGCTGGAAAAGCCCGGCCGCGACCCGCGCCCCGACTTCAAGGTGGCGCGCTTCAACGAGGGCGTGGAAGACATCGCCGACCTCAAGGAAGGCATGGTGCTGGAGGGCACGGTGAGCAACGTGGCGCAGTTCGGCGCCTTCGTCGACCTGGGCGTGCACCAGGACGGGCTGGTGCACGTGAGCCAGTTGGCCAACAAGTTCGTGAGCGACGCGCGCGAGGTGGTCAAGACCGGGCAGATCGTCAAGGTGAAGGTGCTGGAGGTGGACGCGGCGCGCAAGCGCATCAGCCTGACCATGCGGCTCGACGCCACCCCCGCGCGCCGCGACGGGCCGCGCGACAACCGCTTCGAGGGCGCGGGCCGCGGCTACGCCGCGCCGCAGCGCCGCACGAACGAGCCCGCGCCGCAGGGCGCCATGGCCTCGGCATTCGCCAAGCTGCAACAGCGCGGGCGCTGA
PROTEIN sequence
Length: 793
MQQIVRQLAAEIKITESQVRSAVELLDGGATVPFIARYRKEVTGGLDDVQLRELEARLAYLRELEERRVSVLKAIDEQGKLTDALRAQIAAAPTKQELEDIYLPFKQKRRTKGQIAREFGIEPLADKLLADPALDPHAEAQAFCQPATTLDDGKPGPDFSTTFAVLDGVRDILSERWAEDAVLVQSLREWLWAEGLLRSKKVEGKNENDPEVAKFRDYFEYDEPIGRVPSHRALAVFRGRALEILEAKLVLPVEPEPGQPSIAEGRIALHLGWSHAGRKSDDLLRKCVAWTWRVKLSLSTERDLFSRLREEAEKVAIKVFADNLRDLLLAAPAGPRAVMGLDPGIRTGVKVAVVDRTGKLVETATVYPHEPRRDWDGSLAVLGRLCMKHGVQLIAIGNGTASRETDKLAADLIKLMQKQASDPAGQALPAIEKIVVSEAGASVYSASEYASQEMPDVDVSLRGAASIARRLQDPLAELVKIEPKSIGVGQYQHDVNQSELARTLDAVVEDCVNSVGVDLNTASVPLLSRVSGLSGSVAKSVVRWRESNGAFRSRKQLMEVSGLGAKTFEQAAGFLRIRDGENPLDMTGVHPETYPVVQQIIEKTGKPVAELMGRADMLKTLRPELFASEKFGPITVKDILAELEKPGRDPRPDFKVARFNEGVEDIADLKEGMVLEGTVSNVAQFGAFVDLGVHQDGLVHVSQLANKFVSDAREVVKTGQIVKVKVLEVDAARKRISLTMRLDATPARRDGPRDNRFEGAGRGYAAPQRRTNEPAPQGAMASAFAKLQQRGR*