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scnpilot_p_inoc_scaffold_4179_curated_12

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(14308..14847)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 179.0
  • Bit_score: 308
  • Evalue 7.20e-81
Peptide deformylase n=1 Tax=Acidovorax sp. CF316 RepID=J0KGP6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 179.0
  • Bit_score: 308
  • Evalue 5.10e-81
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 179.0
  • Bit_score: 307
  • Evalue 2.10e-81

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGACTGTTCACACGATTTTGAAAATGGGGGATTCGCGCCTGCTGCGCGTGGCCCAGCCTGTCACGGCTTTCGATACCACTGCGTTGCATGGCTTGGTGCGTGACATGCTCGACACCATGCGTGCGGCGAATGGGGCCGGATTGGCCGCGCCACAGATCGGGGTGGACTTGCAGCTGGTGGTGTTCGGCGCGCCACGGCCCAATCCGCGCTACCCTGGCCGGCCCCTGGTACCACCCACGGTACTGGCCAATCCAGTGATCACGCCGCTGGGGGCTGAGGAGGAGTCGGATTGGGAAGGGTGCCTGTCCGTTCCCGGCTTGCGTGGCTGGGTGCCCCGCTGGACGCGCATTCGCTACCAGGGCTTCGATCCCTATGGCGATCCCATCGACCGGGTGGTGGACGGATTCCATGCCCGTGTGGTGCAACATGAGTGCGACCATTTGCAAGGCGTGCTCTACCCCATGCGGGTGCGGGACTTCGCGCGCTTTGGCTTCACCGAGGTGCTTTTTCCTGACGGAAGCATGGCTGAAGACGATTGA
PROTEIN sequence
Length: 180
MTVHTILKMGDSRLLRVAQPVTAFDTTALHGLVRDMLDTMRAANGAGLAAPQIGVDLQLVVFGAPRPNPRYPGRPLVPPTVLANPVITPLGAEEESDWEGCLSVPGLRGWVPRWTRIRYQGFDPYGDPIDRVVDGFHARVVQHECDHLQGVLYPMRVRDFARFGFTEVLFPDGSMAEDD*