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scnpilot_p_inoc_scaffold_1959_curated_1

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 3..2006

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 669.0
  • Bit_score: 1122
  • Evalue 0.0
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 669.0
  • Bit_score: 1122
  • Evalue 0.0
ribonuclease R n=1 Tax=Acidovorax avenae RepID=UPI00030ACD49 similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 680.0
  • Bit_score: 1122
  • Evalue 0.0

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2004
ATCATCGGCCGCCTGTTGCAGGAGAGCGGGGTGTGGCTGGTCGCGCCCGAGGACAAGCGCTACGGCCAGGACGTGCTGATTCCCAAGGGCGCCACCGGCACGGCGAAGACGGGCCAGGTCGTGGTGGTGGAGCTGACCGAGCCGCCGGCCCTGTACGGCCAGCCCGTGGGGCGCATCACCGAGGTGCTGGGCGAGGTGGACGATCCCGGCATGGAGATCGAGATCGCCGTGCGCAAGTACGGCGTGCCGCATGAATTCTCCGAAGCCTGCCTGGCGCAGGCCAAGGCGCTGCCCGACAAGGTGCGCGCGCAGGACAAGAAGCGCCGCGTGGACCTCACCGACGTTCCGCTCGTCACCATCGACGGGGAGGACGCCCGCGACTTCGATGACGCGGTCTACTGCGAGCCCGCCAAGGTGGGGCGCGGCAAGGGCTGGCGCCTGCTGGTGGCCATCGCCGACGTGAGCCACTACGTGCAGACGGGCAGCGCCATCGACGTGGATGCCTACGACCGCGCCACCAGCGTGTACTTTCCGCGCCGCGTCATCCCGATGCTGCCCGAGAAGCTCAGCAACGGCCTGTGCTCGCTCAACCCCGAGGTGGACCGCCTGTGCATGGTCTGCGACATGCTGGTCAGCGGCAAGGGCGAAGTCGCGGCCTACCAGTTCTACCCGGCCGTCATGCACAGCCATGCGCGCTTCACCTACACCGAGGTGGCGGCCATCCTGGCCAATACGCGCGGCCCCGAGGCGCAGCGGCGCCAGGAGCGCGTGCAGGATCTGATCCACCTGTCCGACGTGTACCGGGCGCTGCTGGCCGCGCGCCAGCAGCGCGGCGCGGTGGACTTCGAGACCACGGAGACGCAGATCGTCTGCGACGACAACGGCCGCATCGAGAAGATCGTGCCGCGCACGCGCACCGAGGCGCACCGCCTGATCGAGGAGGCCATGCTGGCCGCCAACGTGTGCAGCGCCGACTTCATCGCCCAGGGCGGCCAGCCCGGCCTGTACCGCGTGCACGAGGGGCCGACGCCGGAAAAGCAGGACATCCTGCGCGGCTACCTCAAGTCCATGGGCGTGGGCCTGTCGATCAGCGACGACCCGCGGCCTGGCGAGTTCCAGGCCATTGCCGAGGCCACCAAGGAGCGGCCCGACGCCCAGCAGATCCACACCATGCTGCTGCGCTCGATGCAGCAGGCCATCTACACGCCCATCAACAGCGGCCACTTCGGCCTGGCCTACGAGGCCTATACGCATTTCACCAGCCCGATCCGGCGCTACCCCGACTTGCTGGTGCACCGCGTCATCAAAGCCATCCTGCTGGGGCAGCGTTACCAGCTGCCCACGCTGCCGACACCGGGCGAGGCGCATGCCAAGCTCTCCAAGCGCCTGGCGGAGCGCGTGAGCGCGCCGCGCCAGCGCCCGCGCAAGGCCGCCGGGGCCGCCTCGGTGGCGGAGACCCAGGCCTGGGAGGCCGCGGGCCTGCACTGCAGCGCCAACGAGCGCCGCGCCGACGAGGCCAGCCGCGACGTCGAGGCCTGGCTCAAGTGCAAGTACATGCGCGAGCATCTGGGCGAGGAGTACAGCGGCCTGGTCTCCGCCGTGACCAGCTTCGGCATCTTCGTCACGCTCGATGCGCTGTACGTCGAAGGCCTGGTGCACATCACCGAGTTGGGCGGCGAGTATTTCCGCTACGACGAGGCCCGCCAGGAGCTGCGCGGCGAGCGCACGGGCATCCGCTATGCGCTGGGCACGCGCGTGCGCGTGCAGGTCAGCCGCGTGGACCTGGATGGGCGCAAGATCGACTTCCGCCTGGTGCAGGAGGGCGGGGACGCGCTGCCCGCGCGGGACAAGGGCGGCAAAGGCGGCCCGGCACCCCAGGCCGGCAAGCCCGAGGCGCGCAAGCCCGCGCCCGCCGAGGGCGCCAGCCCCAAGCGGCATGCCAAGGTCGCGGCGAAAGCAGAAAAACCGGCCGCCAAGGGCAAGGCGCGCAAGGCACGCCGCTGA
PROTEIN sequence
Length: 668
IIGRLLQESGVWLVAPEDKRYGQDVLIPKGATGTAKTGQVVVVELTEPPALYGQPVGRITEVLGEVDDPGMEIEIAVRKYGVPHEFSEACLAQAKALPDKVRAQDKKRRVDLTDVPLVTIDGEDARDFDDAVYCEPAKVGRGKGWRLLVAIADVSHYVQTGSAIDVDAYDRATSVYFPRRVIPMLPEKLSNGLCSLNPEVDRLCMVCDMLVSGKGEVAAYQFYPAVMHSHARFTYTEVAAILANTRGPEAQRRQERVQDLIHLSDVYRALLAARQQRGAVDFETTETQIVCDDNGRIEKIVPRTRTEAHRLIEEAMLAANVCSADFIAQGGQPGLYRVHEGPTPEKQDILRGYLKSMGVGLSISDDPRPGEFQAIAEATKERPDAQQIHTMLLRSMQQAIYTPINSGHFGLAYEAYTHFTSPIRRYPDLLVHRVIKAILLGQRYQLPTLPTPGEAHAKLSKRLAERVSAPRQRPRKAAGAASVAETQAWEAAGLHCSANERRADEASRDVEAWLKCKYMREHLGEEYSGLVSAVTSFGIFVTLDALYVEGLVHITELGGEYFRYDEARQELRGERTGIRYALGTRVRVQVSRVDLDGRKIDFRLVQEGGDALPARDKGGKGGPAPQAGKPEARKPAPAEGASPKRHAKVAAKAEKPAAKGKARKARR*