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scnpilot_p_inoc_scaffold_7667_curated_1

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(2..1960)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCY9_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 679.0
  • Bit_score: 1045
  • Evalue 0.0
RNA polymerase sigma-70 subunit RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 679.0
  • Bit_score: 1045
  • Evalue 0.0
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 679.0
  • Bit_score: 1045
  • Evalue 0.0

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Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1959
ATGCCCGTGCAAAAGTCCGCGAAGTCTGCCAAGCCTGCCGCAGATGCCGCTGAAAAAACCGTTTCCCTCCCGGCCGCCAAAGCCGCAACGAAAGCGTCCACCGTGTCCACACCCAAAAGCAAAGCCCAGCTGCTCAAAGAAGCCGCCGATGAATTGTTGAAGAACGCCGAAGCGCAAGAGAAGAAGAAGCCCGCGCGCAAGCCCAAGGCCACCGCGGACGCCGATGCCGCGGCCGCCGAGGAAGCCCCCAAGAAGAAGGCCGGCCGCCCCGCCAAGGCCGCGGGCGCCGACGACACGGACGCCAAGCCCAAGGCCGCCGCCAAGGCACCCGCCAAGCGCGGACGCAAGCCCAAGGCCAAGGAAGAAGGCGAAGGCATGGGCGACGACGCCGACCTGTCGGACATCGAATCCGAATTGGAAGGCGAAGTCGAGGAAGCGCCGGTGGCCGATGTCGCCACCGAGAAGGTCAAGCCCCTGCGCATGAAGATCAGCAAGGCCAAGGAACGCGCCTTGATGAAGGAGTTCGGCCTGGACGAAACCGTCCTGTCCGAGGAAGACCTGGCCAAGCGCCGCTCGCTGCTCAAGAAGCTCATCACGCTGGGCAAGACGCGCGGCTACCTGACGCGGGTCGAGATTTCCGACCACCTGCCCGACAAGCTGGTGGACGCCGAGACCATGGAAGTCGTGGTCGCCATGCTCAACGACATGGGCGTGGCCGTGTACGAGCAGACGCCCGATGCCGAAACGCTGTTCCAGAACAACGTGACGCCCACGGCCACCACCGTGGAAGAAGCCGAGGAAGAAGCCGAGGCGGCCCTGTCCACCGTCGATTCCGAATTCGGCCGCACCACCGACCCCGTGCGCATGTACATGCGCGAGATGGGCACGGTGGAGCTGCTCACGCGCGAGGGCGAGATCGAGATCGCCAAGCGCATCGAGGGCGGCCTGCAGGACATGATGGAAGCCATCAGCGCCTCGCCCGCCACCATCGCCGAGATCCTCAACATGGCCGAGGAAATCCGCGAGGGCAAGGTCGTCATTTCCACCGTGGTGGACGGTTTCGTCGACGCCGACGAAAACGACGACTACGTGGCCGAGGAAGACTTCGACGAGTACGACGAAGCCGACGACGACGACGGCAAGGGCGGCTCCAAGGCGCTGACCAAGAAGCTCGAAGAGCTGAAGAACGAGGCCCTGCGCCGCTTCGACAAGCTGCGCGAGCAGTTCGAGAAGATGCACAAGGTGTACGACAAGGACGGCTACGGCGGCGCCACGTACATGAAGATCCAGCACACGATCTCGGCCGAGCTGATGACCATCCGCTTCACCGCCAAGACCATCGAGAAGCTGTGCGACATGGTGCGCGCCCAGGTGGACGACGTGCGCAAGAAGGAACGCGAGCTGCGCCGCATCATCGTGGACAAGTGCGGCATGCCGCAGGACACCTTCGTCAAGGACTTCCCGCCCAACCTGCTGAACCTGCAATGGGTGGAGCAGCAGGCCAGCGCCGGCAAGCCCTGGAGCGCCGTGCTGCAGCGCAACATCCCGCCCGTGCAGGAACTGCAGCAGAAACTGATCGACCTGCAGACCCGCGTGGTGGTGCCGCTGTCCGAGCTCAAGGACATCAACAAGCGCATGAACGCCGGCGAAATGGCCTCGCGCGACGCCAAGAAGGAGATGATCGAGGCCAACCTGCGCCTCGTGATCTCCATCGCCAAGAAATACACCAACCGCGGCCTGCAGTTCCTCGACTTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCCGTGGACAAGTTCGAGTACCGCCGCGGCTACAAATTCTCGACCTACGCCACGTGGTGGATCCGCCAGGCGATCACCCGCTCCATCGCGGACCAGGCCCGGACCATCCGCATCCCGGTGCACATGATCGAGACCATCAACAAGATGAACCGCATCAGCCGCCAGCACCTGCAG
PROTEIN sequence
Length: 653
MPVQKSAKSAKPAADAAEKTVSLPAAKAATKASTVSTPKSKAQLLKEAADELLKNAEAQEKKKPARKPKATADADAAAAEEAPKKKAGRPAKAAGADDTDAKPKAAAKAPAKRGRKPKAKEEGEGMGDDADLSDIESELEGEVEEAPVADVATEKVKPLRMKISKAKERALMKEFGLDETVLSEEDLAKRRSLLKKLITLGKTRGYLTRVEISDHLPDKLVDAETMEVVVAMLNDMGVAVYEQTPDAETLFQNNVTPTATTVEEAEEEAEAALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEGGLQDMMEAISASPATIAEILNMAEEIREGKVVISTVVDGFVDADENDDYVAEEDFDEYDEADDDDGKGGSKALTKKLEELKNEALRRFDKLREQFEKMHKVYDKDGYGGATYMKIQHTISAELMTIRFTAKTIEKLCDMVRAQVDDVRKKERELRRIIVDKCGMPQDTFVKDFPPNLLNLQWVEQQASAGKPWSAVLQRNIPPVQELQQKLIDLQTRVVVPLSELKDINKRMNAGEMASRDAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQ