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scnpilot_p_inoc_scaffold_462_curated

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Displaying items 61-74 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_462_curated_61
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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59605..60231
DNA (627bp) protein (209aa)
hypothetical protein id=12552477 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_462_curated_62
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(60287..61159)
DNA (873bp) protein (291aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3]
Glutamate racemase n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7VZS0_9BACT
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_462_curated_63

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comp(61186..62736)
DNA (1551bp) protein (517aa)
Fumarate hydratase class I, aerobic {ECO:0000313|EMBL:AGC72617.1}; EC=4.2.1.2 {ECO:0000313|EMBL:AGC72617.1};; TaxID=1256543 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1134.;"
hydro-lyase, fe-s type, tartrate/fumarate subfamily subunit alpha; K01676 fumarate hydratase, class I [EC:4.2.1.2]
Fumarate hydratase class I, aerobic n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7VTV9_9BACT
scnpilot_p_inoc_scaffold_462_curated_64
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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62857..64260
DNA (1404bp) protein (468aa)
class II fumarate hydratase id=12552473 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
class II fumarate hydratase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_462_curated_65

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64362..64610
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7W1X4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC72615.1}; TaxID=1256543 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1134.;"
hypothetical protein
scnpilot_p_inoc_scaffold_462_curated_66
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(64688..65737)
DNA (1050bp) protein (350aa)
tRNA 2-selenouridine synthase; K06917 tRNA 2-selenouridine synthase [EC:2.9.1.-] id=12553924 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
tRNA 2-selenouridine synthase; K06917 tRNA 2-selenouridine synthase [EC:2.9.1.-]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_462_curated_67

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65785..66873
DNA (1089bp) protein (363aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=1256543 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1134.;"
selenophosphate synthetase (EC:2.7.9.3); K01008 selenide, water dikinase [EC:2.7.9.3]
Selenide, water dikinase n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7VZR7_9BACT
scnpilot_p_inoc_scaffold_462_curated_68

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comp(66966..68060)
DNA (1095bp) protein (365aa)
Putative transmembrane protein n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7VTV6_9BACT
Putative transmembrane protein {ECO:0000313|EMBL:AGC72612.1}; TaxID=1256543 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1134.;"
NlpB/DapX family lipoprotein
scnpilot_p_inoc_scaffold_462_curated_69

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comp(68105..69001)
DNA (897bp) protein (299aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1256543 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1134.;"
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7VYR5_9BACT
scnpilot_p_inoc_scaffold_462_curated_70

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comp(69032..69610)
DNA (579bp) protein (193aa)
Putative SAM-dependent methyltransferase Bucepa02006346 n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7W1X1_9BACT
Putative SAM-dependent methyltransferase Bucepa02006346 {ECO:0000313|EMBL:AGC72610.1}; TaxID=1256543 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1134.;"
type 12 methyltransferase
scnpilot_p_inoc_scaffold_462_curated_71

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comp(69654..69809)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7VZR3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC72608.1}; TaxID=1256543 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1134.;"
scnpilot_p_inoc_scaffold_462_curated_72

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comp(69823..71013)
DNA (1191bp) protein (397aa)
Putative membrane protein n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7VTV3_9BACT
Putative membrane protein {ECO:0000313|EMBL:AGC72607.1}; TaxID=1256543 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1134.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_462_curated_73
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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71158..73134
DNA (1977bp) protein (659aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
DNA topoisomerase (ATP-hydrolyzing) (EC:5.99.1.3); K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase 4 subunit B n=2 Tax=Alicycliphilus denitrificans RepID=E8U266_ALIDB
scnpilot_p_inoc_scaffold_462_curated_74
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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73275..75569
DNA (2295bp) protein (765aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
DNA topoisomerase iv, a subunit (EC:5.99.1.3); K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase 4 subunit A n=2 Tax=Alicycliphilus denitrificans RepID=E8U267_ALIDB
Displaying items 61-74 of 74 in total

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