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scnpilot_p_inoc_scaffold_119_curated

Search features with annotation key words

Displaying items 121-150 of 248 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_119_curated_121
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125391..125618
DNA (228bp) protein (76aa)
Sulfur transfer protein id=5082242 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_119_curated_122
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125623..126420
DNA (798bp) protein (266aa)
Thiazole synthase id=1268705 bin=GWE1_Burkholderiales_65_30 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
thiazole biosynthesis family protein; K03149 thiamine biosynthesis ThiG
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_119_curated_123
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126463..126690)
DNA (228bp) protein (76aa)
SirA-like domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TV21_ALIDB
sira-like domain-containing protein
Redox protein {ECO:0000313|EMBL:GAO23947.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_119_curated_124
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126711..127262)
DNA (552bp) protein (184aa)
NUDIX hydrolase id=12551029 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
NUDIX hydrolase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_125
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127342..128244)
DNA (903bp) protein (301aa)
cysM; cysteine synthase B (EC:2.5.1.47) id=12551030 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cysM; cysteine synthase B (EC:2.5.1.47)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_126
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128522..130765
DNA (2244bp) protein (748aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMF3_9BURK
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EHR73118.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
scnpilot_p_inoc_scaffold_119_curated_127
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130895..131113)
DNA (219bp) protein (73aa)
hypothetical protein id=12551048 bin=BDI species=Acidovorax citrulli genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_128
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131248..132192)
DNA (945bp) protein (315aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023785E8
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU47378.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_119_curated_129
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132379..133572
DNA (1194bp) protein (398aa)
Glutaryl-CoA dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I834_9BURK
glutaryl-CoA dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_119_curated_130
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133747..135000
DNA (1254bp) protein (418aa)
Formyl-CoA transferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRN0_9BURK
Formyl-CoA transferase {ECO:0000313|EMBL:EHL24896.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
formyl-CoA transferase
scnpilot_p_inoc_scaffold_119_curated_131
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135122..135544
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000380DB61
Uncharacterized protein {ECO:0000313|EMBL:GAD22426.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_119_curated_132
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135556..136419
DNA (864bp) protein (288aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002376609
LysR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_119_curated_133
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136457..137176
DNA (720bp) protein (240aa)
Disulfide-bond oxidoreductase YfcG {ECO:0000313|EMBL:KFB76320.1}; EC=1.8.4.- {ECO:0000313|EMBL:KFB76320.1};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
glutathione S-transferase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000311B5A3
scnpilot_p_inoc_scaffold_119_curated_134
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137205..137828
DNA (624bp) protein (208aa)
glutathione S-transferase id=12551056 bin=BDI species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glutathione S-transferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_135
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137830..139209)
DNA (1380bp) protein (460aa)
heavy metal sensor signal transduction histidine kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] id=12551057 bin=BDI species=unknown genus=Rhodoferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
heavy metal sensor signal transduction histidine kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_136
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139206..139880)
DNA (675bp) protein (225aa)
copR; two component response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR id=12551058 bin=BDI species=Thauera sp. 63 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
copR; two component response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_137
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140036..141220
DNA (1185bp) protein (395aa)
hypothetical protein id=12551059 bin=BDI tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_138
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141217..141765
DNA (549bp) protein (183aa)
hypothetical protein id=12551060 bin=BDI species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_139
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141762..142892
DNA (1131bp) protein (377aa)
hypothetical protein id=12551061 bin=BDI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_140
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142894..146010
DNA (3117bp) protein (1039aa)
hypothetical protein; K07239 heavy-metal exporter, HME family id=12551062 bin=BDI tax=BDI organism_group=Betaproteobacteria
hypothetical protein; K07239 heavy-metal exporter, HME family
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_141
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146054..146512
DNA (459bp) protein (153aa)
hypothetical protein id=12551063 bin=BDI tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_142
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146570..147019
DNA (450bp) protein (150aa)
hypothetical protein id=12551064 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_143
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147103..148098
DNA (996bp) protein (332aa)
CheW protein id=12551066 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
CheW protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_144
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148182..148655
DNA (474bp) protein (158aa)
Putative uncharacterized protein id=1267905 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein; K07112
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_145
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148652..149062
DNA (411bp) protein (137aa)
hypothetical protein; K07112 id=12550185 bin=BDI species=unknown genus=Rhodoferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein; K07112
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_146
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149077..149391)
DNA (315bp) protein (105aa)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_147
unknown

Not on your lists

comp(149401..149673)
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_119_curated_148
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149829..150785)
DNA (957bp) protein (319aa)
patatin id=12551069 bin=BDI species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
patatin
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_149
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150857..154786)
DNA (3930bp) protein (1310aa)
sensory box/GGDEF family protein id=12551070 bin=BDI species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
sensory box/GGDEF family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_119_curated_150
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154923..155843
DNA (921bp) protein (307aa)
apbA; ketopantoate reductase ApbA; K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
2-dehydropantoate 2-reductase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8W1_AROAE
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying items 121-150 of 248 in total

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