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scnpilot_p_inoc_scaffold_196_curated

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Displaying items 61-90 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_196_curated_61
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69920..70861)
DNA (942bp) protein (314aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TA70_ACIDE
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_196_curated_62
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70970..72328
DNA (1359bp) protein (453aa)
beta alanine--pyruvate transaminase (EC:2.6.1.-); K00822 beta-alanine--pyruvate transaminase [EC:2.6.1.18]
Aminotransferase {ECO:0000313|EMBL:ABM44206.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABM44206.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Aminotransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD81_ACISJ
scnpilot_p_inoc_scaffold_196_curated_63
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72397..73914
DNA (1518bp) protein (506aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIE4_ACIET
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ACM34882.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_196_curated_64
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74145..76442
DNA (2298bp) protein (766aa)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase {ECO:0000313|EMBL:ABM44208.1}; EC=1.1.1.40 {ECO:0000313|EMBL:ABM44208.1};; EC=2.3.1.8 {ECO:0000313|EMBL:ABM44208.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
malic enzyme (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD83_ACISJ
scnpilot_p_inoc_scaffold_196_curated_65
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76598..77005
DNA (408bp) protein (136aa)
guanine-specific ribonuclease N1 and T1; K01167 ribonuclease T1 [EC:3.1.27.3] id=12550511 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
guanine-specific ribonuclease N1 and T1
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_196_curated_66
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77002..77547
DNA (546bp) protein (182aa)
barstar (barnase inhibitor) id=12550512 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
barstar (barnase inhibitor)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_196_curated_67
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77822..79201
DNA (1380bp) protein (460aa)
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms id=12550514 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
DNA repair protein rada; K04485 DNA repair protein RadA/Sms
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_196_curated_68
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79270..80208
DNA (939bp) protein (313aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42) id=12550516 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_196_curated_69
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80211..80417
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BU85_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24021.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_196_curated_70
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80414..82339
DNA (1926bp) protein (642aa)
glycosyl transferase family protein id=12550518 bin=BDI species=Curvibacter lanceolatus genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glycosyl transferase family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_196_curated_71
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82352..83650
DNA (1299bp) protein (433aa)
O-antigen polymerase id=12550519 bin=BDI species=Burkholderia phymatum genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
O-antigen polymerase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_196_curated_72
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83657..84877)
DNA (1221bp) protein (407aa)
integral membrane sensor signal transduction histidine kinase id=12550522 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
integral membrane sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_196_curated_73
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84887..85708)
DNA (822bp) protein (274aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2H4_ACISJ
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABM40449.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_196_curated_74
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85807..87594)
DNA (1788bp) protein (596aa)
Glutathione-regulated potassium-efflux system protein KefC n=1 Tax=Pseudomonas chlororaphis subsp. aureofaciens 30-84 RepID=J2FDM8_9PSED
Glutathione-regulated potassium-efflux system protein KefC {ECO:0000313|EMBL:EJL07448.1}; TaxID=1038921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis subsp. aureofaciens 30-84.;"
glutathione-regulated potassium-efflux system protein; K11747 glutathione-regulated potassium-efflux system protein KefB
scnpilot_p_inoc_scaffold_196_curated_75
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87584..88957)
DNA (1374bp) protein (458aa)
AmpG permease id=12550524 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
AmpG permease
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_196_curated_76
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88991..89839
DNA (849bp) protein (283aa)
Peptidase M48, Ste24p n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMA6_9BURK
peptidase M48, Ste24p
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_196_curated_77
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89907..90545)
DNA (639bp) protein (213aa)
Beta-lactamase domain protein n=2 Tax=Acidovorax RepID=A1TIV1_ACIAC
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_196_curated_78
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90574..92526)
DNA (1953bp) protein (651aa)
Type II secretion system protein E n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYG9_9BURK
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:AFU44044.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_196_curated_79
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92613..93404)
DNA (792bp) protein (264aa)
exoA; exodeoxyribonuclease ExoA (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exodeoxyribonuclease III Xth n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTZ9_9BURK
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:EHL24154.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
scnpilot_p_inoc_scaffold_196_curated_80
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93410..95326)
DNA (1917bp) protein (639aa)
Ferredoxin--NAD(+) reductase {ECO:0000313|EMBL:AEB86223.1}; EC=1.18.1.3 {ECO:0000313|EMBL:AEB86223.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
ferredoxin--NAD(+) reductase (EC:1.18.1.3)
Oxidoreductase FAD-binding domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH6_ALIDB
scnpilot_p_inoc_scaffold_196_curated_81
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95340..96728)
DNA (1389bp) protein (463aa)
Putative cytochrome c oxidase, subunit I n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQH5_ALIDB
cytochrome c oxidase, subunit i
Putative cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ADV01330.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_196_curated_82
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96776..97279)
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH4_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24880.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_196_curated_83
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97279..98862)
DNA (1584bp) protein (528aa)
Methyl-viologen-reducing hydrogenase delta subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GFZ0_ALIDK
methyl-viologen-reducing hydrogenase subunit delta
Methyl-viologen-reducing hydrogenase delta subunit {ECO:0000313|EMBL:AEB86226.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_196_curated_84
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98877..99740)
DNA (864bp) protein (288aa)
Redoxin domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH2_ALIDB
electron transport protein SCO1/SenC; K07152
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:AEB86227.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_196_curated_85
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99751..100650)
DNA (900bp) protein (300aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] id=12553492 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_196_curated_86
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100666..102366)
DNA (1701bp) protein (567aa)
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome-c oxidase n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH0_ALIDB
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_196_curated_87
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102380..102919)
DNA (540bp) protein (180aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit II n=2 Tax=Alicycliphilus denitrificans RepID=E8TQG9_ALIDB
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:AEB86230.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_196_curated_88
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102936..103091)
DNA (156bp) protein (52aa)
hypothetical protein id=12553495 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_196_curated_89
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103344..104297
DNA (954bp) protein (318aa)
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 id=12553496 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_196_curated_90
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104329..105618
DNA (1290bp) protein (430aa)
acyl-CoA dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002376DBF
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying items 61-90 of 136 in total

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