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scnpilot_p_inoc_scaffold_288_curated

Search features with annotation key words

Displaying items 61-90 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_288_curated_61
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68096..68401
DNA (306bp) protein (102aa)
transcriptional regulator, ArsR family id=12551776 bin=BDI species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
transcriptional regulator, ArsR family
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_62
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68488..69453
DNA (966bp) protein (322aa)
metal ion transport protein; K03284 magnesium transporter id=12550667 bin=BDI species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
magnesium and cobalt transport protein CorA; K03284 magnesium transporter
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_63
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69496..69936)
DNA (441bp) protein (147aa)
hypothetical protein id=12494941 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_64
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70094..71248
DNA (1155bp) protein (385aa)
diguanylate cyclase id=12551769 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
diguanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_65
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71279..72052)
DNA (774bp) protein (258aa)
proq activator of osmoprotectant transporter prop id=12550666 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
fertility inhibition FinO-like protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_66
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72073..73296)
DNA (1224bp) protein (408aa)
glcF; glycolate oxidase, iron-sulfur subunit GlcF id=12550757 bin=BDI species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
gclF; Glycolate oxidase iron-sulfur subunit; K11473 glycolate oxidase iron-sulfur subunit
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_67
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73318..74124)
DNA (807bp) protein (269aa)
hypothetical protein id=12550756 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_68
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74126..75226)
DNA (1101bp) protein (367aa)
fad linked oxidase domain-containing protein; K11472 glycolate oxidase FAD binding subunit id=12550755 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
fad linked oxidase domain-containing protein; K11472 glycolate oxidase FAD binding subunit
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_69
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75507..76937)
DNA (1431bp) protein (477aa)
ammonium transporter; K03320 ammonium transporter, Amt family id=12550754 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ammonium transporter; K03320 ammonium transporter, Amt family
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_70
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76974..77312)
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II; K04752 nitrogen regulatory protein P-II 2 id=12550753 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
nitrogen regulatory protein P-II
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_71
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77326..78057)
DNA (732bp) protein (244aa)
hypothetical protein id=12550752 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_72
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78250..79788
DNA (1539bp) protein (513aa)
Mg chelatase subunit ChlI id=12550751 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_73
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80058..80831
DNA (774bp) protein (258aa)
oxidoreductase fad/NAD(P)-binding domain-containing protein; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAK9_ACIET
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ACM31656.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_288_curated_74
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80828..81562
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q397G7_BURS3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
scnpilot_p_inoc_scaffold_288_curated_75
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81562..82125
DNA (564bp) protein (188aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T730_ACIDE
scnpilot_p_inoc_scaffold_288_curated_76
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82079..84190)
DNA (2112bp) protein (704aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SH91_GALCS
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=GWA2_Gallionellales_60_142_curated
scnpilot_p_inoc_scaffold_288_curated_77
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84272..87013)
DNA (2742bp) protein (914aa)
Methionine synthase {ECO:0000313|EMBL:AEB82631.1}; EC=2.1.1.13 {ECO:0000313|EMBL:AEB82631.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Methionine synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TT21_ALIDB
scnpilot_p_inoc_scaffold_288_curated_78
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87306..87722
DNA (417bp) protein (139aa)
Hemerythrin HHE cation binding domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TS75_ALIDB
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:CDM22680.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hemerythrin hhe cation binding domain protein
scnpilot_p_inoc_scaffold_288_curated_79
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87715..88179)
DNA (465bp) protein (155aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002375215
transmembrane pair domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_80
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88323..89630
DNA (1308bp) protein (436aa)
glu/leu/phe/val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
Glutamate dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TT19_ALIDB
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_288_curated_81
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89723..90835)
DNA (1113bp) protein (371aa)
hypothetical protein id=12551768 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_82
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91027..92091)
DNA (1065bp) protein (355aa)
methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Methionine synthase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWU7_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_83
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92459..93040
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIC9_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34867.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_288_curated_84
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93187..93477
DNA (291bp) protein (97aa)
signal peptidase i; K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Signal peptidase I n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MID0_ACIET
scnpilot_p_inoc_scaffold_288_curated_85
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93474..93965
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MID1_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34869.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_288_curated_86
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93970..94659
DNA (690bp) protein (230aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MID2_ACIET
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACM34870.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_288_curated_87
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94656..94871
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000381A65B
Uncharacterized protein {ECO:0000313|EMBL:EWS62810.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
scnpilot_p_inoc_scaffold_288_curated_88
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95003..96262)
DNA (1260bp) protein (420aa)
imidazolonepropionase (EC:3.5.2.7); K01468 imidazolonepropionase [EC:3.5.2.7]
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Imidazolonepropionase n=2 Tax=Alicycliphilus denitrificans RepID=E8TU96_ALIDB
scnpilot_p_inoc_scaffold_288_curated_89
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96325..97257)
DNA (933bp) protein (311aa)
hutG; formimidoylglutamase; K01479 formiminoglutamase [EC:3.5.3.8] id=12549758 bin=BDI species=Caldimonas manganoxidans genus=Caldimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hutG; formimidoylglutamase (EC:3.5.3.8); K01479 formiminoglutamase [EC:3.5.3.8]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_288_curated_90
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97269..98987)
DNA (1719bp) protein (573aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49]
Urocanate hydratase n=1 Tax=Acidovorax sp. CF316 RepID=J1EG08_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying items 61-90 of 108 in total

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