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scnpilot_p_inoc_scaffold_188_curated

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Displaying items 121-141 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_188_curated_121
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(132803..133417)
DNA (615bp) protein (205aa)
Maf-like protein AcdelDRAFT_3214 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8I4_ACIDE
Maf-like protein AcdelDRAFT_3214 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
maf protein
scnpilot_p_inoc_scaffold_188_curated_122
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133511..133978)
DNA (468bp) protein (156aa)
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U0F7_ALIDB
scnpilot_p_inoc_scaffold_188_curated_123
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(134000..134818)
DNA (819bp) protein (273aa)
Ribosomal silencing factor RsfS n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8I2_ACIDE
iojap family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_188_curated_124
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134988..135926)
DNA (939bp) protein (313aa)
coproporphyrinogen III oxidase (EC:1.3.3.3) id=12553348 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
coproporphyrinogen III oxidase (EC:1.3.3.3)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_188_curated_125
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135923..137206)
DNA (1284bp) protein (428aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
Phosphoribosylamine--glycine ligase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q9Q4_ACIAP
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_188_curated_126
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(137289..138008)
DNA (720bp) protein (240aa)
transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035EA338
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
scnpilot_p_inoc_scaffold_188_curated_127
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138087..139616
DNA (1530bp) protein (510aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXM1_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL22831.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_188_curated_128
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139630..140463
DNA (834bp) protein (278aa)
type II and III secretion system protein; K02453 general secretion pathway protein D id=12553344 bin=BDI species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_188_curated_129
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140616..141599
DNA (984bp) protein (328aa)
pyridoxal-5'-phosphate-dependent enzyme subunit beta; K01754 threonine dehydratase [EC:4.3.1.19]
threo-3-hydroxyaspartate ammonia-lyase id=12553338 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_188_curated_130
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141659..142288
DNA (630bp) protein (210aa)
upp; uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9]
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
uracil phosphoribosyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037A5887
scnpilot_p_inoc_scaffold_188_curated_131

Not on your lists

comp(142413..144137)
DNA (1725bp) protein (575aa)
nitrite reductase (EC:1.7.2.1); K15864 nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
Uncharacterized protein n=2 Tax=Bacteria RepID=K2CVV9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD97125.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_188_curated_132
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144364..146649
DNA (2286bp) protein (762aa)
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein id=12553311 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_188_curated_133
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146722..148062)
DNA (1341bp) protein (447aa)
serine/threonine protein kinase id=12550428 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_188_curated_134
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148137..149579)
DNA (1443bp) protein (481aa)
sbcB; exonuclease I (EC:3.1.11.1)
Exodeoxyribonuclease I n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T199_ACIDE
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_188_curated_135
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149705..150343)
DNA (639bp) protein (213aa)
OmpA/MotB protein id=12550265 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
OmpA/MotB domain-containing protein; K03286 OmpA-OmpF porin, OOP family
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_188_curated_136
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


150567..153209
DNA (2643bp) protein (881aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
DNA gyrase, a subunit (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037A851A
scnpilot_p_inoc_scaffold_188_curated_137
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153319..154428
DNA (1110bp) protein (370aa)
phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52]
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Phosphoserine aminotransferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHF4_ACIET
scnpilot_p_inoc_scaffold_188_curated_138
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154444..155541
DNA (1098bp) protein (366aa)
chorismate mutase; K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
Chorismate mutase / prephenate dehydratase n=2 Tax=Acidovorax RepID=A1W8Q2_ACISJ
Chorismate mutase {ECO:0000313|EMBL:ACM32858.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_188_curated_139
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155551..156429
DNA (879bp) protein (293aa)
prephenate dehydrogenase id=12550261 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
prephenate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_188_curated_140
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156533..158563
DNA (2031bp) protein (677aa)
bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase (EC:2.7.4.14)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTX0_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_188_curated_141
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


158725..159879
DNA (1155bp) protein (385aa)
30S ribosomal protein S1 n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI000378F3A2
50S ribosomal protein S1; K02945 small subunit ribosomal protein S1
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
Displaying items 121-141 of 141 in total

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