ggKbase home page

scnpilot_p_inoc_scaffold_278_curated_35

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(39701..41659)

Top 3 Functional Annotations

Value Algorithm Source
sigma54-dependent DNA-binding transcriptional regulator id=12550410 bin=BDI species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 652.0
  • Bit_score: 892
  • Evalue 2.30e-256
sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 643.0
  • Bit_score: 752
  • Evalue 9.00e-215
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 652.0
  • Bit_score: 895
  • Evalue 5.00e-257

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1959
ATGCCTTCCACAGTTTTTCCAGGGCGAGCGGTGCCTGGTGCCCTGCGCAACGCGCGCTGGCATTTGATGAATGCGGGTACCTTGCCTGCGGACGCGCTGCCGCCCGAGCTCTCGAATTCCTGGCTGCGCAGTTGGCAGGCGGGCCTGCAGCCTTGCGGGCGTATGTCTGGCGTGCCCCATGCATCGGGTGCCCAGTTGGCCCGGGCGTTGGACATGCAGCGCGAACTGGTGGCCCATGCGCGGCCGGTGATGGAGTTTCTGTGCGAGCAGACGCGCGACTCCGACAGCCTGGTCATTCTTGCCGGGGCCGATGGCATGCTGCTGCACGCCTCGGGCGATCCCCGCTTCATGGGTCGCGCCGAGCGCGTGGCCTTGCGGCCTGGTGCGACCTGGAGCGAGCAGTACCGCGGAACCAACGCCATAGGCACGGCGCTGGCCGACGACCGGGCCCTCGTGGTGCATGCACAGGAGCATTTTCTGGAGCGCAACAGCTTCCTGACCTGTGCGGCCGCTCCCATCCATGCGGCCGACGGGCGTCTTCTGGGGGTGCTGGACGTCTCGGGAGACCACAGGGGGTATCACCGGCATACCCTGGGGTTGGTGCGCTCGGCGGTCAGGATCATCGAGCACCGGTTGTTCGAGACCAAACACGACCCAAGGCATTGGCAGGGGCTGCGCCTGCGCCTGCATGCCCAGCCCGAGGGCCTGGGCACGGTCACCGAGGGCTTGCTCGCCGTGCGTGACGACGGCGTGCTGGCGGGGGCCAGCGTTGCGGCGCTCAGCGCGCTGGGCCTGCAGTGGCGCGATGTGGGCGCAACCCGTCTAGACGCGGTGTTGACCGAGCCTCTGGAGCAGTTGTGGCAATGGAGTCAGAAGCATGGCGCCGCGGCCCGTGTCGTGCACACCGTGGCCGGGCAGGCGCTGTGGGTCAAGGCCGAGGCTGGCCGGGTCACGCAGGCAGCCATTTTTACCACCGTGCCTGCACGCGAACACATTGTGCCGGTGGGGGACGCGCTCTCCCGCATCGACACGGGGGACGTGGTATGGCATGCGGCCGTGGAGCGTGCGCGCAAGGTCGCCGGCAAACCCATTGCGCTGCTGCTACAGGGGGAGTCCGGCGTGGGCAAGGAGGTTTTCGCCCGTGCGGTGCACCACAGCGGGCCGCGTAGCCACAAGCCTTTTGTGGCGGTCAATTGTGCGGCATTGCCGGAGCAGCTCATCGAGGCGGAGCTGTTTGGCTACCTCCCGGGCGCATTCACCGGTGCGCGCCGGGAGGGGGCGCCAGGGCGTATCCGCGAAGCCGAGGGCGGTACGCTTTTCCTCGATGAAATCGGTGACATGCCCCTGGCCTTGCAGGCACGGCTGCTGCGCGTGCTGCAGGACCGCGAGGTCAGCCCCTTGGGCGGGGGCAAGCCGGTTGCGGTGGACTTTGCCCTGGTCTGCGCGACCCACCGCAGGCTGGCCCAGGAGATCGAGGCCGGGCGTTTCCGCGAGGACCTCTACTACCGGCTCAATGGCTTGACGCTGCAACTGCCTGCCTTGCGCGAACGCACGGATTTCGACCACCTGCTCGACAGCCAGCTCCAGGCGCTCATGCCGCACAAGACGCTGGCCATCGCTGCCGGGCTGCGGGAGCGGCTGCGTGCCTACCCCTGGCCAGGCAATATGCGCCAGCTCTCCTCGGTGCTGCGCACCGTGTGTGCCTTGCTTGAGGAGGACGACTTGGTGATCGATTGGCAGCACCTGCCCGACGACCTGGCGCATGTGCTGCGGCTGCAGCCGGGCACCACTCCGGAGCCATCCGAGGACCTGCCCACGGATCTGCGCTCATTGTCGCAGCACAGCATTGCACGCGCACTGCAGGCCTGTGCAGGCAATTACTCGGAGGCGGCGCGCATGCTCGGCATAGGCCGCAGCACCCTCTACCGGAAGCTGCGCAGGCCGGGCCTGCCCGGCTGA
PROTEIN sequence
Length: 653
MPSTVFPGRAVPGALRNARWHLMNAGTLPADALPPELSNSWLRSWQAGLQPCGRMSGVPHASGAQLARALDMQRELVAHARPVMEFLCEQTRDSDSLVILAGADGMLLHASGDPRFMGRAERVALRPGATWSEQYRGTNAIGTALADDRALVVHAQEHFLERNSFLTCAAAPIHAADGRLLGVLDVSGDHRGYHRHTLGLVRSAVRIIEHRLFETKHDPRHWQGLRLRLHAQPEGLGTVTEGLLAVRDDGVLAGASVAALSALGLQWRDVGATRLDAVLTEPLEQLWQWSQKHGAAARVVHTVAGQALWVKAEAGRVTQAAIFTTVPAREHIVPVGDALSRIDTGDVVWHAAVERARKVAGKPIALLLQGESGVGKEVFARAVHHSGPRSHKPFVAVNCAALPEQLIEAELFGYLPGAFTGARREGAPGRIREAEGGTLFLDEIGDMPLALQARLLRVLQDREVSPLGGGKPVAVDFALVCATHRRLAQEIEAGRFREDLYYRLNGLTLQLPALRERTDFDHLLDSQLQALMPHKTLAIAAGLRERLRAYPWPGNMRQLSSVLRTVCALLEEDDLVIDWQHLPDDLAHVLRLQPGTTPEPSEDLPTDLRSLSQHSIARALQACAGNYSEAARMLGIGRSTLYRKLRRPGLPG*