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scnpilot_p_inoc_scaffold_254_curated_52

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 55218..55847

Top 3 Functional Annotations

Value Algorithm Source
ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=12549949 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 210.0
  • Bit_score: 363
  • Evalue 2.00e-97
50S ribosomal protein L25/general stress protein Ctc similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 211.0
  • Bit_score: 342
  • Evalue 1.20e-91
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 210.0
  • Bit_score: 363
  • Evalue 2.90e-97

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGAATTTCGTCGCTTTTGAGCGCGCCAAGCAAGGCACGGGTGCGAGCCGCCGCCTGCGCAACTCGGGCCGTACGCCCGGCATCGTCTACGGCGCGGGTGCCCAGCCCCTGGCCGTCGAAGTGGACCACAACGCCCTGTGGCACGCCCTGAAGAAGGAAGCCTTCCACTCCAGCGTGCTCGACATGGAGTACAACGGCCAGGTCAGCAAGGTGCTGCTGCGCGATGTGCAGTACCACCCCTACAAGCAGTTGGTGCTGCACGTGGACTTCCAGCGCGTGGACGACAAGACCAAGCTGCACATGAAGGTGCCCCTGCACTACAGCGGCGCCGAAGAATCGCCTGCCGTGAAGGTGGACAAGTGCATGGTCACGCCCGTGGTGACCGAACTGGACGTGACCTGCATGCCCTCGGACCTGCCCGAGTTCATCGCCGTGGACCTCTCCGGCCTGCAGAAGAACGTCTCCCTGCACCTCAAGGACATCAAGCTGCCCAAGGGCGTGGCGGCCAAGACCCGCGGTGCGCAGAACAACCCCGTGCTGGTGTCCGTGGTGGCGCCGGTGGTCGAGGTCGAGGCGCCTGCCGCCGACGCTGCAGCACCCGCCAAGGGCAAGGGCAAGGGCAAGAAGTAA
PROTEIN sequence
Length: 210
MNFVAFERAKQGTGASRRLRNSGRTPGIVYGAGAQPLAVEVDHNALWHALKKEAFHSSVLDMEYNGQVSKVLLRDVQYHPYKQLVLHVDFQRVDDKTKLHMKVPLHYSGAEESPAVKVDKCMVTPVVTELDVTCMPSDLPEFIAVDLSGLQKNVSLHLKDIKLPKGVAAKTRGAQNNPVLVSVVAPVVEVEAPAADAAAPAKGKGKGKK*