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scnpilot_p_inoc_scaffold_281_curated_56

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 59499..60536

Top 3 Functional Annotations

Value Algorithm Source
TIM-barrel protein, nifR3 family; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 344.0
  • Bit_score: 623
  • Evalue 3.30e-176
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 344.0
  • Bit_score: 623
  • Evalue 1.50e-175
tRNA-dihydrouridine synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GFW3_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 344.0
  • Bit_score: 623
  • Evalue 1.10e-175

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGCACATCGGCCCCATCCCCCTGGCCAACCGCCTCTTTGTTGCCCCCATGGCGGGGGTGACGGACCGGCCGTTCCGCCAGTTGTGCAAGCGCCTGGGCGCGGGCTATGCGGTGAGCGAGATGGTGACCTCGCGCAAGGACCTGTGGAACAGCCTCAAGACCTCGCGCCGCGCCAACCACGAGGGCGAGCCGGGGCCGATCGCGGTGCAGATCGCGGGCACCGATGCAGCCATGATGGCCGAGGCGGCGGTCTACAACATCGATCGCGGAGCGCAGATCATCGACATCAACATGGGCTGCCCGGCCAAGAAGGTGTGCAACAAATGGGCGGGCTCGGCGCTGATGCAGAACGAGACCCTGGCCGTGCAGATCGCCGAGGCCGTGGTGGCGGCCTGCGCGCCGCACCGCGTGCCCGTCACGCTCAAGATGCGCACGGGCTGGTGCCAGCGGCACCGCAACGCCGTGCCGCTGGCGCGCCAGTTCGAGGCCGTGGGCATCCAGATGCTCACGGTGCATGGCCGCACGCGCGAGCAGGGGTACCAGGGCCAGGCCGAGTACGACACCATCGCCGCGGTGAAGGCGCAGGTGGCCATCCCCGTGGTCGCCAATGGCGACATCACCACCCCCGAAAAGGCGCGCGCCGTGCTGGCGCATACCGGCGCAGACGCCGTCATGGTGGGGCGCGCCGCCCAGGGGCGGCCGTGGATCTTCCGCGAGATCGCGCATTACCTGGCCACGGGCGAGCACCTGGCCCCGCCCCGGGTGGACGAGCTGCGCAGCCTGCTGCTCGAACACCTGCAGGACCACTACCGCCTCTACGGCGAGGGCGCGGGCACGCGCAGCGCGCGCAAGCACATCGCCTGGTACCTGCGCGGCCTGCCCGGGGGCGAGGCCTTCAGACAACATATCAATACCATCGACGACTGCCAGGCGCAATGGCAGGCCGTGGCCGGCTATCTGGACGCCCTGGGGCAGCAGATGGACCGGCTGCCCCCCGCCCCCTTGCAGGACGCCGATGCACAAGAAGCGGAGGGATGA
PROTEIN sequence
Length: 346
MHIGPIPLANRLFVAPMAGVTDRPFRQLCKRLGAGYAVSEMVTSRKDLWNSLKTSRRANHEGEPGPIAVQIAGTDAAMMAEAAVYNIDRGAQIIDINMGCPAKKVCNKWAGSALMQNETLAVQIAEAVVAACAPHRVPVTLKMRTGWCQRHRNAVPLARQFEAVGIQMLTVHGRTREQGYQGQAEYDTIAAVKAQVAIPVVANGDITTPEKARAVLAHTGADAVMVGRAAQGRPWIFREIAHYLATGEHLAPPRVDELRSLLLEHLQDHYRLYGEGAGTRSARKHIAWYLRGLPGGEAFRQHINTIDDCQAQWQAVAGYLDALGQQMDRLPPAPLQDADAQEAEG*