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scnpilot_p_inoc_scaffold_281_curated_86

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 94696..95136

Top 3 Functional Annotations

Value Algorithm Source
Putative host attachment protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XKX3_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 143.0
  • Bit_score: 109
  • Evalue 2.20e-21
putative host attachment protein similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 143.0
  • Bit_score: 109
  • Evalue 6.90e-22
Putative host attachment protein {ECO:0000313|EMBL:AGU52954.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.2
  • Coverage: 143.0
  • Bit_score: 109
  • Evalue 3.10e-21

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGAAGACAGATTGGGTTCTTGTGGCCAACGGATCGATGGCCCGCGTGTTGAGCCGCACCGCGCCTGACGCTGCGCTGGTTCCTGTGATGACGGTGCCTTTTCCGGAAGGCCGGCTCAAGGCGCACGAGCAGGACACAGATCGGCCCGGCCAGGGGCACAGTGACACCAGCAGCGCAAGCATCCGGTTTGAGCCGCGCACGACCCGGCGGCGCAAGCTCCTGCAGCAGTTCGCCCGGGAAATGTCCCACCGGCTGGACCAAGGCCGCAACGACAGGCACTTCGAATCCTTGACCATCGTCGCCTCCAGCCCCTTCCTGGGCGAGCTGCGTTCCGCGCTGTCACCCCAGGTGACCAAGTGTGTGGCGGGCGTCTACGACGTCGACCTGACCGAACTGAGCGCGGACAAGATTGAGAACCGCTTGCGGGATCTGGCGGCCTGA
PROTEIN sequence
Length: 147
MKTDWVLVANGSMARVLSRTAPDAALVPVMTVPFPEGRLKAHEQDTDRPGQGHSDTSSASIRFEPRTTRRRKLLQQFAREMSHRLDQGRNDRHFESLTIVASSPFLGELRSALSPQVTKCVAGVYDVDLTELSADKIENRLRDLAA*