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scnpilot_p_inoc_scaffold_1161_curated_13

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(12216..13490)

Top 3 Functional Annotations

Value Algorithm Source
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) id=12552291 bin=BDI species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 412.0
  • Bit_score: 745
  • Evalue 3.00e-212
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 415.0
  • Bit_score: 741
  • Evalue 1.80e-211
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 415.0
  • Bit_score: 741
  • Evalue 7.80e-211

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Taxonomy

Acidovorax citrulli → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGCTGACGCAAGACAACCACCCTATTGCCATCGCTGCGCCGCTGCGCAGGATCACGCGGCAGGCGCGGGCCGTCTGGGGCGCACGCGTGGTCACCATGGGGGGCGGCGCGCCCGTGCGCGTGCAGTCCATGACGAACACCGATACGGTCGATGCCATTGCCACCGCCATTCAGGTCAAGGAGCTGGCGCAGGCGGGCTCCGAATTGGTGCGTATCACCGTCAATACTCCCGAGGCCGCCCAGGCGGTTCCCTACATCCGGGAGCAGCTCGACCGCATGGGCGTCGATGTGCCTCTGGTGGGCGACTTCCACTACAACGGCCACAAGCTGCTGACGGAATACCCGGATTGCGCGCAGGCGCTGTCCAAGTACCGCATCAACCCCGGTAACGTCGGCAAGGGCGACAAGCGCGACCGCCAGTTCGGCCAGATGATCGAGGCGGCCATGCGCTGGAACAAGTGCATACGCATCGGCGTGAACTGGGGCAGCCTGGACCAGGAGCTGCTCGCCAGCCTGATGGACGCCAACAGCCAGCGTGCCAACCCCTGGGATGCCAGGCAGGTGATGTACGAGGCGCTCATTGCTTCGGCCATCGGCTCGGCCCGCCGCGCTGAAGACATGGGGATGGATGGCAGCCAGATCATTCTGTCCTGCAAGGTCAGTGGCGTGCAGGACCTGATTGCCGTCTACCGCGAGCTGGCGCGGCGTTGTGACTACTCTTTGCACCTGGGGCTGACCGAGGCAGGCATGGGCACCAAGGGCACGGTGGCCTCTGCGGCGGCGTTGTCCGTGCTGCTGCAGGAAGGCATAGGCGACACGATCCGTGTCTCGCTGACGCCGCAACCCGGGGAGGCGCGCACACAGGAAGTCGTGGTGGCCTCCGAGATCCTGCAGGCACTGGGCTTGCGCATGTTCGTGCCCAGCGTGACGGCCTGCCCTGGATGCGGCCGTACCACGAGCACCACGTTCCAGGAACTGGCCAAGCAGATCGACGACTTCCTGCGGGCGCAAATGCCCATCTGGCGTGAGCAGTATCCGGGGGTCGAAGGCCTCCGGGTCGCGGTCATGGGGTGTATCGTCAATGGCCCTGGCGAGAGCAAGCACGCAGACATAGGCATCAGCCTGCCCGGCACGGGCGAAGCCCCCGCGGCGCCGGTATACATCGACGGCGAAAAGGCCCTGACCCTGCGCGGCGACCATATTGCTCAGGAATTCCACCAGATCGTGCAGGACTACATCGAAAAGCGGTTTGGCCAGACCACGGAGCAGCACTAA
PROTEIN sequence
Length: 425
MLTQDNHPIAIAAPLRRITRQARAVWGARVVTMGGGAPVRVQSMTNTDTVDAIATAIQVKELAQAGSELVRITVNTPEAAQAVPYIREQLDRMGVDVPLVGDFHYNGHKLLTEYPDCAQALSKYRINPGNVGKGDKRDRQFGQMIEAAMRWNKCIRIGVNWGSLDQELLASLMDANSQRANPWDARQVMYEALIASAIGSARRAEDMGMDGSQIILSCKVSGVQDLIAVYRELARRCDYSLHLGLTEAGMGTKGTVASAAALSVLLQEGIGDTIRVSLTPQPGEARTQEVVVASEILQALGLRMFVPSVTACPGCGRTTSTTFQELAKQIDDFLRAQMPIWREQYPGVEGLRVAVMGCIVNGPGESKHADIGISLPGTGEAPAAPVYIDGEKALTLRGDHIAQEFHQIVQDYIEKRFGQTTEQH*