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scnpilot_p_inoc_scaffold_1054_curated_24

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 24405..25226

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase Rsu; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 273.0
  • Bit_score: 421
  • Evalue 2.00e-115
RNA-binding S4 domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX53_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 273.0
  • Bit_score: 421
  • Evalue 6.30e-115
RNA-binding S4 domain protein {ECO:0000313|EMBL:ADU98321.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 273.0
  • Bit_score: 421
  • Evalue 8.90e-115

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGCCCCCTGCTTCCGGACGCGCCGCCGAGCGCGCCGCCCCCGGCCCTGCCGCCGCTGCCGACGGCGCGGCGCCCGTGCGCCTGAACAAGCGCCTGGCCGATCTGGGCCTGTGCTCGCGCCGCGAGGCCGACGAATGGATTGCGCGCGGCTGGGTGCTGGTCAACGGCCAGGTGGCCGCCATGGGCAGCAAGGTGCAGCCGCAGGACCGTGTCACGGTGCAGCAGGCCGCGCGCCGCCAGCAGGCGGGGCAGGTCACCATCCTCCTGCACAAGCCCGTGGGCTATGTCTCGGGCCAGGCCGAGGATGGCCATCCGCCCGCAGCCACGCTCATCTCCCAGCGCAGCCACTGGAGCGGTGATGCCAGCGGCCAGCGCTTCACGCCGGCGCAGCTCAAGGGGCTGGCGCCCGCCGGGCGGCTCGACATCGACTCCGTGGGCCTGCTGGTGCTCACGCAGGACGGGCGCGTGGCGCGCCAGCTCATTGGCGAGGACTCCGGCATCGACAAGGAATACCTGGTGCGCGTGCAGTACGGCAGCGTGGCCACGGATGTGCAGGCGGCCTTTCCGGTGCAGCAGCTCGCGCGCCTGCGCCACGGCCTGAGCCTGGACGGCCAGCCGCTCAAGCCCGCGCAGGTCGACTGGCAAAACCCCGAGCAGCTGCGCTTCGTGCTCACCGAGGGCAAGAAGCGCCAGATCCGGCGCATGTGCGAGCTCGTGGGCCTGAAGGTGGTGGGCCTGAAGCGCATCCGCATCGGCCGCGTCCTGCTGGGGCGCCTGCCCGTGGGGCAGTGGCGCTACCTGGCGCCGGATGAACGCTTCTGA
PROTEIN sequence
Length: 274
MPPASGRAAERAAPGPAAAADGAAPVRLNKRLADLGLCSRREADEWIARGWVLVNGQVAAMGSKVQPQDRVTVQQAARRQQAGQVTILLHKPVGYVSGQAEDGHPPAATLISQRSHWSGDASGQRFTPAQLKGLAPAGRLDIDSVGLLVLTQDGRVARQLIGEDSGIDKEYLVRVQYGSVATDVQAAFPVQQLARLRHGLSLDGQPLKPAQVDWQNPEQLRFVLTEGKKRQIRRMCELVGLKVVGLKRIRIGRVLLGRLPVGQWRYLAPDERF*