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scnpilot_p_inoc_scaffold_317_curated

Search features with annotation key words

Displaying items 61-90 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_317_curated_61
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(74008..75030)
DNA (1023bp) protein (341aa)
alkanal monooxygenase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003651708
Contig17, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78257.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
luciferase-like monooxygenase
scnpilot_p_inoc_scaffold_317_curated_62
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(75124..75711)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W265_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92038.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_63
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(75827..76408)
DNA (582bp) protein (194aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W264_DYAFD
putative Crp/Fnr family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACT92037.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_64
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

76584..77009
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380ECA4
Histidine kinase {ECO:0000313|EMBL:KIF31095.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
response regulator receiver protein
scnpilot_p_inoc_scaffold_317_curated_65
unknown

Not on your lists

comp(77060..77182)
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_317_curated_66
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

77265..77426
DNA (162bp) protein (54aa)
Putative transcriptional regulator n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z7S7_BELBD
HxlR family transcriptional regulator {ECO:0000313|EMBL:AKD57179.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_p_inoc_scaffold_317_curated_67
unknown

Not on your lists

77817..77966
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_317_curated_68
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(78222..79823)
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037640FF
peptidase C39 bacteriocin processing
Peptidase C39 bacteriocin processing {ECO:0000313|EMBL:AEI49436.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_317_curated_69
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(79804..80976)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000381E0F8
glycosyltransferase 28 domain-containing protein
Glycosyltransferase 28 domain protein {ECO:0000313|EMBL:AEI47362.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_317_curated_70
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(81202..82263)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037BFA77
Uncharacterized protein {ECO:0000313|EMBL:BAQ61469.1}; TaxID=1615909 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3708.;"
hypothetical protein
scnpilot_p_inoc_scaffold_317_curated_71
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(82324..83352)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ELH8_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI47369.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_317_curated_72
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(83330..84346)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQ36_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAY27445.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
hypothetical protein
scnpilot_p_inoc_scaffold_317_curated_73
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(84371..85681)
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTI9_DYAFD
hypothetical protein; K02022 HlyD family secretion protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92932.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_74
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(85695..88073)
DNA (2379bp) protein (793aa)
ABC transporter related n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VT80_DYAFD
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
ABC transporter related {ECO:0000313|EMBL:ACT96444.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_75
Geminocystis sp. NIES-3709, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(88107..89183)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037BFA77
Uncharacterized protein {ECO:0000313|EMBL:BAQ64655.1}; TaxID=1617448 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3709.;"
hypothetical protein
scnpilot_p_inoc_scaffold_317_curated_76
unknown

Not on your lists

comp(89529..89780)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_317_curated_77
Prevotella melaninogenica, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(89841..90365)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Prevotella sp. F0091 RepID=U2KK26_9BACT
putative lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:ADK95699.1}; TaxID=553174 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella melaninogenica (strain ATCC 25845 / DSM 7089 / JCM 6325 /; VPI 2381 / B282) (Bacteroides melaninogenicus).;"
scnpilot_p_inoc_scaffold_317_curated_78
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(91101..91532)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVP4_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07465.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
Type IV secretory pathway VirD4 components-like protein
scnpilot_p_inoc_scaffold_317_curated_79
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(91957..92628)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KCW3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH01966.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_317_curated_80
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(92794..94104)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035EFCE5
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACT92144.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_81
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

94603..95337
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W071_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91805.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_82
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

95426..95878
DNA (453bp) protein (151aa)
CHRD domain containing protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W072_DYAFD
CHRD domain-containing protein
CHRD domain containing protein {ECO:0000313|EMBL:ACT91806.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_83
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(95939..97177)
DNA (1239bp) protein (413aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
DEAD/DEAH box helicase domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W073_DYAFD
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACT91807.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_84
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(97267..97566)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W074_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91808.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_85
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(97574..98452)
DNA (879bp) protein (293aa)
Chaperone DnaJ domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W075_DYAFD
chaperone DnaJ domain-containing protein; K05516 curved DNA-binding protein
Chaperone DnaJ domain protein {ECO:0000313|EMBL:ACT91809.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_86
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(98499..98720)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036D9BDC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91810.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_87
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

98820..99803
DNA (984bp) protein (328aa)
Oxidoreductase domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W077_DYAFD
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT91811.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_88
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

99879..99992
DNA (114bp) protein (38aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W078_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91812.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_89
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(100062..100361)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003624E56
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91813.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_317_curated_90
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

100527..101402
DNA (876bp) protein (292aa)
AraC family transcriptional regulator; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W080_DYAFD
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT91814.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 61-90 of 98 in total

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