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scnpilot_p_inoc_scaffold_15_curated

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Displaying items 331-360 of 462 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_15_curated_331

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comp(388389..389009)
DNA (621bp) protein (207aa)
ABC transporter related n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2P8_DYAFD
ABC transporter {ECO:0000313|EMBL:AIA18759.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ABC transporter
scnpilot_p_inoc_scaffold_15_curated_332

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comp(389032..389922)
DNA (891bp) protein (297aa)
Beta-lactamase {ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|SAAS:SAAS00063099};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Crb3 n=1 Tax=uncultured bacterium AOCarb3 RepID=D6MLV4_9BACT
beta-lactamase class A
scnpilot_p_inoc_scaffold_15_curated_333

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comp(389955..391154)
DNA (1200bp) protein (400aa)
Transporter-associated region n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2P9_DYAFD
Transporter associated domain protein {ECO:0000313|EMBL:AIA14404.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transporter-associated protein
scnpilot_p_inoc_scaffold_15_curated_334

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comp(391151..391426)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003659F90
Uncharacterized protein {ECO:0000313|EMBL:AIA14403.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_15_curated_335
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

391666..392745
DNA (1080bp) protein (360aa)
fructose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
Fructose-bisphosphate aldolase, class II {ECO:0000313|EMBL:ACT93905.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ACT93905.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
fructose-bisphosphate aldolase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036E90EA
scnpilot_p_inoc_scaffold_15_curated_336
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(392810..394717)
DNA (1908bp) protein (636aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000363FD14
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93906.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_337
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(394877..395242)
DNA (366bp) protein (122aa)
Transcriptional regulator, HxlR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2Q4_DYAFD
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ACT93908.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_338
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

395350..395985
DNA (636bp) protein (212aa)
Nitroreductase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2Q5_DYAFD
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ACT93909.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_339
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

396031..396738
DNA (708bp) protein (236aa)
DSBA oxidoreductase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036AA9F5
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ACT93910.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_340
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

396940..399504
DNA (2565bp) protein (855aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E0686
Uncharacterized protein {ECO:0000313|EMBL:ACT93911.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
hypothetical protein
scnpilot_p_inoc_scaffold_15_curated_341
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(399505..401361)
DNA (1857bp) protein (619aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2Q8_DYAFD
peptidase M1 membrane alanine aminopeptidase
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:ACT93912.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_342
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(401785..403314)
DNA (1530bp) protein (510aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3D6_DYAFD
scnpilot_p_inoc_scaffold_15_curated_343
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

403625..406066
DNA (2442bp) protein (814aa)
TonB-dependent receptor n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3D8_DYAFD
TonB-dependent receptor {ECO:0000313|EMBL:ACT93915.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_15_curated_344
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(406190..407380)
DNA (1191bp) protein (397aa)
pgk; phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Phosphoglycerate kinase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3D9_DYAFD
scnpilot_p_inoc_scaffold_15_curated_345
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

407731..409458
DNA (1728bp) protein (576aa)
VRR-NUC domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3E0_DYAFD
VRR-NUC domain-containing protein
VRR-NUC domain protein {ECO:0000313|EMBL:ACT93917.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_346
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(409445..410242)
DNA (798bp) protein (266aa)
endonuclease n=1 Tax=Dyadobacter beijingensis RepID=UPI0003716616
endonuclease/exonuclease/phosphatase; K06896
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ACT93918.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_347
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

410320..411642
DNA (1323bp) protein (441aa)
peptidase M16 n=1 Tax=Dyadobacter beijingensis RepID=UPI000381AE13
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ACT93919.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_348
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

411666..413042
DNA (1377bp) protein (459aa)
Peptidase M16 domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3E3_DYAFD
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ACT93920.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_349
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

413093..413959
DNA (867bp) protein (289aa)
sugar phosphate isomerase n=1 Tax=Dyadobacter beijingensis RepID=UPI000374D12E
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACT93921.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_350
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(414124..416019)
DNA (1896bp) protein (632aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003772245
Uncharacterized protein {ECO:0000313|EMBL:EGK01526.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SusD family.
scnpilot_p_inoc_scaffold_15_curated_351
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(416035..419601)
DNA (3567bp) protein (1189aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003760189
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDE59375.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
TonB-linked outer membrane protein, SusC/RagA family
scnpilot_p_inoc_scaffold_15_curated_352
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(419697..420836)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035D5840
Uncharacterized protein {ECO:0000313|EMBL:AHW62017.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
anti-sigma factor
scnpilot_p_inoc_scaffold_15_curated_353
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(420928..421515)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035CBF0D
Uncharacterized protein {ECO:0000313|EMBL:ETZ21506.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
sigma-70 family RNA polymerase sigma factor
scnpilot_p_inoc_scaffold_15_curated_354
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

421654..422664
DNA (1011bp) protein (337aa)
flavonol synthase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003685C92
2OG-Fe(II) oxygenase; K06892
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ACT93922.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_355
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

422723..423865
DNA (1143bp) protein (381aa)
Chromate transporter, chromate ion transporter (CHR) family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3E6_DYAFD
chromate transporter; K07240 chromate transporter
Chromate transporter, chromate ion transporter (CHR) family {ECO:0000313|EMBL:ACT93923.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_356
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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423941..424195
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036A0270
Putative uncharacterized protein {ECO:0000313|EMBL:EDX71583.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
hypothetical protein
scnpilot_p_inoc_scaffold_15_curated_357
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

424424..427402
DNA (2979bp) protein (993aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Beta-lactamase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3E7_DYAFD
beta-lactamase
scnpilot_p_inoc_scaffold_15_curated_358
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

427465..427785
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000365177E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93925.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_359
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

427965..428909
DNA (945bp) protein (315aa)
peptidase U61 LD-carboxypeptidase A; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
peptidase S66 n=1 Tax=Dyadobacter beijingensis RepID=UPI00036D3068
Peptidase U61 LD-carboxypeptidase A {ECO:0000313|EMBL:ACT93927.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_360
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

428906..429706
DNA (801bp) protein (267aa)
short-chain dehydrogenase n=1 Tax=Dyadobacter beijingensis RepID=UPI000370A2A8
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT93928.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 331-360 of 462 in total

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