ggKbase home page

scnpilot_p_inoc_scaffold_15_curated

Search features with annotation key words

Displaying items 61-90 of 462 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_15_curated_61
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(66539..66835)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BKX3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM81120.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
hypothetical protein
scnpilot_p_inoc_scaffold_15_curated_62
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(66933..67304)
DNA (372bp) protein (124aa)
Globin n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0N1_DYAFD
globin; K06886 hemoglobin
Globin {ECO:0000313|EMBL:ACT93637.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_63
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(67389..68162)
DNA (774bp) protein (258aa)
AMP nucleosidase; K01241 AMP nucleosidase [EC:3.2.2.4]
AMP nucleosidase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036037A0
AMP nucleosidase {ECO:0000313|EMBL:ACT93638.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_64
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

68214..68663
DNA (450bp) protein (150aa)
Restriction endonuclease, type I, EcoRI, R subunit/Type III n=1 Tax=Dyadobacter beijingensis RepID=UPI00036B240E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93639.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_65
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(68758..69366)
DNA (609bp) protein (203aa)
lipid-binding protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000365328E
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ACT93640.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_66
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(69425..69883)
DNA (459bp) protein (153aa)
Transcriptional regulator, MarR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0N5_DYAFD
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACT93641.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_67
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

69997..70572
DNA (576bp) protein (192aa)
septum formation inhibitor Maf n=1 Tax=Dyadobacter beijingensis RepID=UPI00037B967D
maf protein; K06287 septum formation protein
Maf-like protein Dfer_2424 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_68
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

70582..72111
DNA (1530bp) protein (510aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Alpha amylase catalytic region n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0N7_DYAFD
alpha amylase
scnpilot_p_inoc_scaffold_15_curated_69
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

72172..73182
DNA (1011bp) protein (337aa)
gluconolactonase; K01053 gluconolactonase [EC:3.1.1.17]
Gluconolactonase {ECO:0000313|EMBL:ACT93644.1}; EC=3.1.1.17 {ECO:0000313|EMBL:ACT93644.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Gluconolactonase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0N8_DYAFD
scnpilot_p_inoc_scaffold_15_curated_70
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(73183..73638)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003706D10
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93645.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_71
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(73739..74257)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000360886E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93646.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_72
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

74469..74972
DNA (504bp) protein (168aa)
GtrA family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0P1_DYAFD
GtrA family protein
GtrA family protein {ECO:0000313|EMBL:ACT93647.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_73
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(74976..76157)
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ACT93648.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ACT93648.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Acetyl-CoA acetyltransferase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0P2_DYAFD
scnpilot_p_inoc_scaffold_15_curated_74
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(76210..76461)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003805914
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93649.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_75
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(76504..78039)
DNA (1536bp) protein (512aa)
Major facilitator superfamily MFS_1 n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0P4_DYAFD
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACT93650.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_76
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(78169..78456)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0P5_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93651.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_77
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

78746..79483
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0P6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93652.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_78
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

79513..80616
DNA (1104bp) protein (368aa)
6-phosphogluconolactonase {ECO:0000313|EMBL:ACT93653.1}; EC=3.1.1.31 {ECO:0000313|EMBL:ACT93653.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000372AF44
6-phosphogluconolactonase
scnpilot_p_inoc_scaffold_15_curated_79
unknown

Not on your lists

80639..80824
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_15_curated_80
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

80916..81458
DNA (543bp) protein (181aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0P8_DYAFD
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT93654.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_81
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

81528..82562
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037868CC
FecR anti-FecI sigma factor
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACT93655.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_82
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

82725..86102
DNA (3378bp) protein (1126aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037B20F8
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT93656.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_15_curated_83
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

86131..87705
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003660BD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93657.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_84
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

87950..89170
DNA (1221bp) protein (407aa)
selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0Q2_DYAFD
Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein {ECO:0000313|EMBL:ACT93658.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_85
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

89223..90476
DNA (1254bp) protein (418aa)
dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3]
Amidohydrolase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0Q3_DYAFD
Amidohydrolase {ECO:0000313|EMBL:ACT93659.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_86
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

90640..92334
DNA (1695bp) protein (565aa)
NHL repeat containing protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0Q4_DYAFD
NHL repeat containing protein
NHL repeat containing protein {ECO:0000313|EMBL:ACT93660.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_87
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

92462..92893
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003709D7A
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ACT93661.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_88
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

92978..94459
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037F1F89
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93662.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_89
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

94497..94964
DNA (468bp) protein (156aa)
Endoribonuclease L-PSP n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0Q7_DYAFD
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACT93663.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_15_curated_90
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

95257..95868
DNA (612bp) protein (204aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0Q8_DYAFD
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT93664.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 61-90 of 462 in total

View Taxonomy