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scnpilot_p_inoc_scaffold_83_curated_197

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 198159..199592

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD n=1 Tax=Dyadobacter beijingensis RepID=UPI00035DC71E similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 477.0
  • Bit_score: 855
  • Evalue 2.30e-245
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 478.0
  • Bit_score: 855
  • Evalue 9.40e-246
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACT94080.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 478.0
  • Bit_score: 855
  • Evalue 4.20e-245

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1434
ATGGCACGTAAATCTTCGAAACGGATCTGGTGGATAACGGGAGGTGTTCTGGTGCTGCTCGTGGGTGGGTTGTTTGGAGCCAAGCAGGCTGGCTACATCGGCAAACCCAAAACCACCGAAGTCGAATATGCGATCGTCAAAAAGTCGGACATTATCGAACGGGTGAGTGCATCGGGGAAAGTGCAGCCGGAAGTGGAAGTAAAGCTCAGCCCGGACGTTTCGGGGGAGATCATCGCATTGAACGTAGCCGAAGGCGATTCGGTGGTGAAAGGACAGCTGCTATTAAAAATCCGTCCCGATAACTACGAGTCGTTGATGGCGCGTGCGCAGGCAGCCGTGAATTCGAGCAAGGCGAATTATGAGCAAACCAAAGCCATGGTAGCGCAGGCCGAAGCACGGCTGGTTCAGGCGAAGGCCAACTTCGAACGTAACAAGAAGCTTTTTGCTGATAAAGTAATCTCGTCCGCCGATTTTGAACAATTTTCATCCACTTATGGCGTAGCCCAGCAGGATGTGGAGTCGTCGAAGGCCAATGTGGCTGCGGCACTCTTCAATATCAAGAGCGCCGAAGCAAGCTTGCGCGACGCTGCGGAAAACCTTCGCAAAACCAGCATTTTTGCACCGGTGAGCGGTATTGTATCCTTATTGAATGTAGAAGCCGGCGAGCGTGTGGTAGGTACTTCCCAAATGGCAGGTACTGAAATGATGCGCATTGCCAACCTGGCCGATATGGAAGTGCGGGTGAATGTGAATGAGAACGACATTGTGCGGGTGTCGATCGGCGATACTGCCGAGATCGACGTGGATGCTTACAGTTCGTCGGGCCGTAAGTTCAAAGGGGTTGTGAAGGAAATTGCAAACACTGCCGCCGGATTAGCTTCGGCTTCGTCGACATCAACCTCTGCTGCAAGCACATCGGCCGATGCCGTGACGGAATTCCAGGTGAAAGTGAAAATTCTGAATGAGTCATTCGAAGACCTGATGACCGCACGATCGAAAAAATCTTATCCTTTCAAACCCGGTATGACAGCCTCTGTGGAGATCATTACAGAACGTAAAAACGGTGTGGTTTCAGTGCCTATCGCGGCGGTGACTACCCGCGGGGGCGCAGCGCAGGTGATCCCGGGCTCGGGTGACGGCTCGAACAACAACGCACCGGTAGCAGAAGAAGACGAAAAGAAGCCGAAAAAGCAGGAAGTGATTAAGGAAGTGGTATTTATCGACGTAAACGGTAAAGCCGAAATGAAGGAAGTGAAGACGGGTATCAGCGATTTTGAGAACATTGAAATCCTTTCAGGACTGAAACCAGGCGACAGGATTATTTCCGGACCGTATATTGCTGTATCCAAAAACCTGAATAACGGTGACCTGGTTGAGAAAAAGAAGGAGGATCCGAAAAAAGATGGAAAAAAATCAAATGAAAACCCGAACTGA
PROTEIN sequence
Length: 478
MARKSSKRIWWITGGVLVLLVGGLFGAKQAGYIGKPKTTEVEYAIVKKSDIIERVSASGKVQPEVEVKLSPDVSGEIIALNVAEGDSVVKGQLLLKIRPDNYESLMARAQAAVNSSKANYEQTKAMVAQAEARLVQAKANFERNKKLFADKVISSADFEQFSSTYGVAQQDVESSKANVAAALFNIKSAEASLRDAAENLRKTSIFAPVSGIVSLLNVEAGERVVGTSQMAGTEMMRIANLADMEVRVNVNENDIVRVSIGDTAEIDVDAYSSSGRKFKGVVKEIANTAAGLASASSTSTSAASTSADAVTEFQVKVKILNESFEDLMTARSKKSYPFKPGMTASVEIITERKNGVVSVPIAAVTTRGGAAQVIPGSGDGSNNNAPVAEEDEKKPKKQEVIKEVVFIDVNGKAEMKEVKTGISDFENIEILSGLKPGDRIISGPYIAVSKNLNNGDLVEKKKEDPKKDGKKSNENPN*