ggKbase home page

scnpilot_p_inoc_scaffold_15_curated_145

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(156702..157448)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 247.0
  • Bit_score: 431
  • Evalue 1.70e-118
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 247.0
  • Bit_score: 431
  • Evalue 7.80e-118
tRNA pseudouridine synthase A n=1 Tax=Dyadobacter beijingensis RepID=UPI000361BEC6 similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 247.0
  • Bit_score: 438
  • Evalue 4.50e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 747
ATGCGCTATTTCCTGGAATTCAGTTACCGCGGCACGGCTTACAATGGCTGGCAAAAACAGAACAATGCATTGGGCGTCCAGCAGGTGCTGGAAGAGGCTTTTGCCAAAATACTGAGAATGGCCGTCGAACTTACCGGCAGCAGCCGCACCGATGCGGGTGTACATTCAGAACAACAATTCGCTCATTTTGATTTACCAGAATCGATTGCTGATGCCGATTTGCTGGTTTACAAACTGAATGCATTGATTCCCAAAGATATTGCCGTTCAGCGCATTATTGCAGTGGACGATGAGATCCATTCCAGGTTTGCAGCCACGCACAGAAAGTACGAGTACCGCATCACTTATCAGAAAAATCCATTTTTGACAGACCTCGCCACCCCCATGCGCCGGAACCTGGACGTAGCCCGCATGAACGAGGCGGCGGCATTGCTGCTCATCTATACCGATTTCGAAAGTTTCAGCAAGATCCATACAAATGTCAATAACTTTCGCTGTACCGTTACGGAGTCGCACTGGGTGGAATCGGGCGAAATGCTGGTATTTCATGTCAAAGCAAACCGCTTTCTGAGAGGTATGGTGCGGGCATTGGTGGGCACGATGCTGGAAGTAGGGCGTAACAAGCTTACCGTGAGCGATTTTGAGCAGATCATCCTTTCGCGCAACAGAAAAAATGCCGGAGCGCAGGCCCCGGCAGAAGGTTTGTTCCTGGTGGAAGTCGGTTATCCCCCGACGCTGTTTACCTGA
PROTEIN sequence
Length: 249
MRYFLEFSYRGTAYNGWQKQNNALGVQQVLEEAFAKILRMAVELTGSSRTDAGVHSEQQFAHFDLPESIADADLLVYKLNALIPKDIAVQRIIAVDDEIHSRFAATHRKYEYRITYQKNPFLTDLATPMRRNLDVARMNEAAALLLIYTDFESFSKIHTNVNNFRCTVTESHWVESGEMLVFHVKANRFLRGMVRALVGTMLEVGRNKLTVSDFEQIILSRNRKNAGAQAPAEGLFLVEVGYPPTLFT*