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scnpilot_p_inoc_scaffold_15_curated_222

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(258320..258880)

Top 3 Functional Annotations

Value Algorithm Source
ribosome maturation factor RimM n=1 Tax=Dyadobacter beijingensis RepID=UPI00037EF597 similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 187.0
  • Bit_score: 349
  • Evalue 2.10e-93
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 186.0
  • Bit_score: 341
  • Evalue 1.80e-91
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 186.0
  • Bit_score: 341
  • Evalue 8.00e-91

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGACACAGGATAACTGTTATTTATTGGGCTATATCGTGCGGACGCATGGCACCGCCGGTAATGTGGTAATTTATATGGATGTGGACTATCCGGATGATTATGAAGATCTGGAAACCGTTTACGTCGAGATCAAAGGCGAACTGGTACCTTACTTTATCGAGGAAATCAATTTGCAGAAGCAGAGCAATGCGATCGTGACTTTTGAAGACGTTGATTCCATTGTGAAGGCGCAGGCTCTGGTAGGAAGCTCGCTTTATCTGCCGTTGGAGGATTTGCAGGAGCTCGGCGACGACGAGTTTTATTACCATGAAATCAAAGGGTTCAAGGTGGTGGATGAAACGAAAGGTGAGCTGGGCATTGTGCGGGAAGTGTACTCGCTGAACGGCCAGGATCTGATCGCGATGGATTACCAGGGCTCGGAAGTGCTGATTCCCACCGCAAATGACATCGTTCTCAAAGCGGATAAGGAAGCGAAATCCCTCCTGGTAAACCTGCCGGAAGGGTTACTGGAAGTTTATCTCGATGATTCATCAGAAAATACGCCTGACGATGCGGATTGA
PROTEIN sequence
Length: 187
MTQDNCYLLGYIVRTHGTAGNVVIYMDVDYPDDYEDLETVYVEIKGELVPYFIEEINLQKQSNAIVTFEDVDSIVKAQALVGSSLYLPLEDLQELGDDEFYYHEIKGFKVVDETKGELGIVREVYSLNGQDLIAMDYQGSEVLIPTANDIVLKADKEAKSLLVNLPEGLLEVYLDDSSENTPDDAD*