ggKbase home page

scnpilot_p_inoc_scaffold_153_curated_2

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 3246..4157

Top 3 Functional Annotations

Value Algorithm Source
xylose isomerase n=1 Tax=Dyadobacter beijingensis RepID=UPI000363A63F similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 303.0
  • Bit_score: 568
  • Evalue 3.60e-159
xylose isomerase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 303.0
  • Bit_score: 552
  • Evalue 6.30e-155
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACT94481.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 303.0
  • Bit_score: 552
  • Evalue 2.80e-154

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 912
ATGAGCACAATTATCGAACAGGCTGACCGCCGTACCTTCCTCAAAACGACCTCAGGAATGATAGCTGGTCTTGCACTAGGCGGAAGCCTTACCGAGACTATGGCCAGGGCTGCTGAAAACACGGCTTACAGCATTCCGCTAGGTGTGTATGCGGCCTATGACAAAGCCGACTTTTTGCGTAAATCAGGGTGTGCATATATAGAAGAATCTGTGGCAGGCTTCCTCATTCCGGAAGGCGGCGATGCCGGTTATGAGCAAAACCTTCAACAACTCAAAACCGAACATTTCCCCATCAAGTCCTATGTGATCCTGCTACCGGCAAGCCTTAAAACACTTGGCCCTGAGGCAAATCACGAGGCTATCCTTCAAAGGACGGAAACCGTCCTGAAACGTGCCAAGGAATGTGGCTCACAGTTTGTGGTATTTGGTAGTGGTGCTTCAAGAATCATACCCGAAGGTTTCGATCGTGCAAAGGCAAAAGCCCAGCACATTGAATTGACCCAAAAAATGGCACCGATAGCCGAAAAATACGGCGTTACCATCGCAGTAGAGCCGCTGAACCGCGGGGAAACCAACTTCATCAACAGCCTGGCCGAGGGTGTCGAGATCGTAGATGCCGTCAAAAGCCCGCGCGTGAAGCTGCTTTGCGACATATATCATATGCTAAAGGAGGACGAGCCGGCATCCGAGATCGTCAAGTATGGCAAACACATCGTGCATTGCCACATCGCAGAGAAAGAAAAACGCACGCCGCCGGGTGTGAAGGGCGACGACTTCAGGGCTTACCTGGCCGCATTGAAGAAAATCGGCTACAAAGGTGGATTATCGATCGAATGCTTCGTGTATACCGATTTTGAGAAAGAGGCAAAACGAGGCGTAGAAGTGCTCAAACAGCAACTGAGTGAAGTCTAG
PROTEIN sequence
Length: 304
MSTIIEQADRRTFLKTTSGMIAGLALGGSLTETMARAAENTAYSIPLGVYAAYDKADFLRKSGCAYIEESVAGFLIPEGGDAGYEQNLQQLKTEHFPIKSYVILLPASLKTLGPEANHEAILQRTETVLKRAKECGSQFVVFGSGASRIIPEGFDRAKAKAQHIELTQKMAPIAEKYGVTIAVEPLNRGETNFINSLAEGVEIVDAVKSPRVKLLCDIYHMLKEDEPASEIVKYGKHIVHCHIAEKEKRTPPGVKGDDFRAYLAALKKIGYKGGLSIECFVYTDFEKEAKRGVEVLKQQLSEV*