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scnpilot_p_inoc_scaffold_153_curated_57

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(65738..66397)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 219.0
  • Bit_score: 397
  • Evalue 2.50e-108
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 219.0
  • Bit_score: 397
  • Evalue 1.10e-107
Pseudouridine synthase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VS09_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 219.0
  • Bit_score: 397
  • Evalue 7.80e-108

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 660
ATGGCACTGCACCGCTACTTCATTATCAACAAGCCGCAAAATATGGTTTCGCAGTTCGTCAGCTCGCATGATGTGCGGCTGCTGGGAGCGCTGGATTTTGAGTTTCCCGAGGGCACGCATGCAATCGGGCGGCTCGACAACCTTTCGGAAGGCCTGCTGATCCTTACCACCAATAAAAAAGTAACTAACCTGTTATTTCTGAGCGAGGTACCACACAAGCGTACGTATTGGGTGAATGTGGGCCACGTCGTTCCGCCGGAAACGGTGGAGTTGCTGCGTACGGGCATACCCATCCGCGTGAGAGGGGGCGGTTATTACACAACAGCGCCATGTGAAGTCGAAATCATCGACCGGCCCGCCGTTTTAGATAAACATAAAAATGAAACGCAGCCAGATGTGCCCAACACCTGGCTCAGCATTACACTCACAGAAGGAAAATACCACCAGGTAAGGAAGATGGTGCGCGAGGCCAATCACCGTTGCCGGCGCCTCATCCGGGCCAGTATCGAAGATTTGGAGCTGGGCGACCTGCCGCCGGGAGGAGTGAGGGAGATTGAGGAAGAAGAATTTTTCCGGTTGCTGAAAATCGACAACTGGAAGTCAGCGATTTCTTCCGGCGATTTCCTCATGGAGCCGTCTATCGAAAATCCGGCATATTAG
PROTEIN sequence
Length: 220
MALHRYFIINKPQNMVSQFVSSHDVRLLGALDFEFPEGTHAIGRLDNLSEGLLILTTNKKVTNLLFLSEVPHKRTYWVNVGHVVPPETVELLRTGIPIRVRGGGYYTTAPCEVEIIDRPAVLDKHKNETQPDVPNTWLSITLTEGKYHQVRKMVREANHRCRRLIRASIEDLELGDLPPGGVREIEEEEFFRLLKIDNWKSAISSGDFLMEPSIENPAY*