ggKbase home page

scnpilot_p_inoc_scaffold_61_curated

Search features with annotation key words

Displaying items 121-150 of 261 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_61_curated_121
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(125608..127017)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB55_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42138.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_61_curated_122
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

127031..127831
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB56_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_61_curated_123
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

127828..128382
DNA (555bp) protein (185aa)
ATP/cobalamin adenosyltransferase (EC:2.5.1.17)
cobalamin adenosyltransferase n=1 Tax=Myroides injenensis RepID=UPI000289EB8C
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_61_curated_124
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

128412..128858
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIK3_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_61_curated_125
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

129022..129243
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB60_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42143.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_61_curated_126
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(129273..130331)
DNA (1059bp) protein (353aa)
Glycosyl transferase family 2 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBV1_FLUTR
family 2 glycosyl transferase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_61_curated_127
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(130324..131247)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBV2_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_61_curated_128
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

131261..131815
DNA (555bp) protein (185aa)
Crossover junction endodeoxyribonuclease ruvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 /
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBV3_FLUTR
scnpilot_p_inoc_scaffold_61_curated_129
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(131918..132265)
DNA (348bp) protein (116aa)
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_61_curated_130
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(132262..133593)
DNA (1332bp) protein (444aa)
amidohydrolase; K01465 dihydroorotase [EC:3.5.2.3]
Amidohydrolase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y7G2_9SPHI
Amidohydrolase {ECO:0000313|EMBL:EHQ29383.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_p_inoc_scaffold_61_curated_131
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(133590..134306)
DNA (717bp) protein (239aa)
Dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
Dolichyl-phosphate beta-D-mannosyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBV7_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_61_curated_132
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(134390..134848)
DNA (459bp) protein (153aa)
Regulatory protein RecX n=1 Tax=Kordia algicida OT-1 RepID=A9DL91_9FLAO
RecX family transcriptional regulator; K03565 regulatory protein
Tax=CG_Flavo_02
scnpilot_p_inoc_scaffold_61_curated_133
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(134849..135889)
DNA (1041bp) protein (347aa)
riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Riboflavin biosynthesis protein RibD n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAW6_FLUTR
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_61_curated_134
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

135973..138027
DNA (2055bp) protein (685aa)
OmpA/MotB domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKF8_FLUTR
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEA45084.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_61_curated_135
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(138090..139265)
DNA (1176bp) protein (392aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W187_9FLAO
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFK34102.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_61_curated_136
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(139207..143562)
DNA (4356bp) protein (1452aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CC18_SPHS2
CzcA family heavy metal efflux pump; K07239 heavy-metal exporter, HME family
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ADZ77468.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_61_curated_137
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(143618..144010)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000372DDB2
Strain DSM 12611 Contig13, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51755.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_61_curated_138
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

144127..144822
DNA (696bp) protein (232aa)
DNA repair protein RadC n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ENC4_RUNSL
DNA repair protein RadC; K03630 DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:AEI49885.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_61_curated_139
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

144871..146016
DNA (1146bp) protein (382aa)
WecB2; UDP-N-acetylglucosamine 2-epimerase; K13019 UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] rbh
UDP-N-acetylglucosamine 2-epimerase id=3886540 bin=GWF2_Bacteroidetes_29_10 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_p_inoc_scaffold_61_curated_140
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

146010..147299
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKK2_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_61_curated_141
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

147283..148212
DNA (930bp) protein (310aa)
GSCFA domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKK3_FLUTR
GSCFA domain-containing protein
GSCFA domain protein {ECO:0000313|EMBL:AEA45129.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_61_curated_142
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

148318..149208
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHY5_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45944.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_61_curated_143
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

149392..150924
DNA (1533bp) protein (511aa)
GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIH7_FLUTR
scnpilot_p_inoc_scaffold_61_curated_144
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

150961..152703
DNA (1743bp) protein (581aa)
Peptidoglycan-binding lysin domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIH8_FLUTR
peptidoglycan-binding lysin domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_61_curated_145
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

152700..154259
DNA (1560bp) protein (520aa)
Apolipoprotein N-acyltransferase {ECO:0000256|SAAS:SAAS00250216}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00088950};; Flags: Precursor;; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
Apolipoprotein N-acyltransferase n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BUR4_9FLAO
scnpilot_p_inoc_scaffold_61_curated_146
unknown

Not on your lists

154272..154637
DNA (366bp) protein (122aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_61_curated_147
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

154647..156956
DNA (2310bp) protein (770aa)
Ig domain protein group 2 domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC80_FLUTR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_p_inoc_scaffold_61_curated_148
unknown

Not on your lists

157054..157452
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_61_curated_149
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

157454..159451
DNA (1998bp) protein (666aa)
Ig domain protein group 2 domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB30_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_61_curated_150
Weeksella virosa, Weeksella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(159490..160107)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000363021B
metal dependent phosphohydrolase; K06950 uncharacterized protein
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADX67551.1}; TaxID=865938 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Weeksella.;" source="Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC; 16016 / NCTC 11634 / CL345/78).;"
Displaying items 121-150 of 261 in total

View Taxonomy