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scnpilot_p_inoc_scaffold_124_curated_111

Organism: scnpilot_dereplicated_Flavobacteriia_1

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(125355..125921)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKK5_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 188.0
  • Bit_score: 202
  • Evalue 4.20e-49
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 188.0
  • Bit_score: 202
  • Evalue 1.30e-49
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 179.0
  • Bit_score: 205
  • Evalue 9.00e-50

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Taxonomy

R_Fluviicola_43_260 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 567
GTGGATAAAAAAGAGAAATTAGATAATATTATTCAGGGTTGTTTGCGCCAGGAGCGGGCAAGCCAGGAAGCATTATTTAAGTTTTTTTATTCAAAAATGCTGACGGTTTGTCTGCGCTATACTTCTGACCGCGATACGGCTCAGGAATTATTGCAGGACGGATTTATTAAGATCTTTGATAAGCTGGAACGATATGAAGATGCAGGCTCGTTTGAAGGCTGGGTGAGAAGAATTATGGTAAATACATGTATAGATCATTACCGTAAATCAAAAAAAGATCCTGTCCTCTACGATGATGATTCGGTTTTCAGAGATGTGGATGATACACTTTCGGGATTTGGAGATGAAGATCTGACCGAGATGAATTCACAGCTGGTGATGAAAGCGATTGCAGAGTTGAGTCCCGCATACCGTACCGTTTTCAACATGTTTGTAATTGAAAATTACTCACATAAAGAAATAGCGGATACACTTGGGATTTCAGAAGGAACTTCCAAATCGAATCTGGCAAAAGCAAAGGCAAATCTCCAGAAAGCACTGAAGGATAAGTTGAAAAAAATGTATTGA
PROTEIN sequence
Length: 189
VDKKEKLDNIIQGCLRQERASQEALFKFFYSKMLTVCLRYTSDRDTAQELLQDGFIKIFDKLERYEDAGSFEGWVRRIMVNTCIDHYRKSKKDPVLYDDDSVFRDVDDTLSGFGDEDLTEMNSQLVMKAIAELSPAYRTVFNMFVIENYSHKEIADTLGISEGTSKSNLAKAKANLQKALKDKLKKMY*