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scnpilot_p_inoc_scaffold_347_curated_25

Organism: scnpilot_dereplicated_Flavobacteriia_1

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(26133..26441)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B5D6DC similarity UNIREF
DB: UNIREF100
  • Identity: 34.3
  • Coverage: 102.0
  • Bit_score: 80
  • Evalue 9.90e-13
regulatory protein LuxR similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 102.0
  • Bit_score: 73
  • Evalue 3.80e-11
Regulatory protein LuxR {ECO:0000313|EMBL:ACU06328.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.4
  • Coverage: 102.0
  • Bit_score: 73
  • Evalue 1.70e-10

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 309
ATGTCCTTACGTAATGTTTGGAATTCCTTTTTAAAGGAAACATCGCCTACCCACTTACCGAATAAAAATATTTCAGAGATATTATCCGGGATCACAAATGTTGGATCTTTTTACTCTTTCATCTTAGATATTCATGAGCTGAGTATTTCAAATATCGTTGGAGATTTTGAAAAAATACATGGGATATTTCCGGAGAATATAACACTGGACGCGATCTTTTCACTGATTCATCCGGATGATTTGGAATTTATTGCCAAAGCAGATGCAAAGCTGCTTTCCATGTTTTACAATGAATTGGGGCCGGAATAA
PROTEIN sequence
Length: 103
MSLRNVWNSFLKETSPTHLPNKNISEILSGITNVGSFYSFILDIHELSISNIVGDFEKIHGIFPENITLDAIFSLIHPDDLEFIAKADAKLLSMFYNELGPE*