ggKbase home page

scnpilot_p_inoc_scaffold_178_curated_25

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 42340..43704

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein radA n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GVU9_FLAPJ similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 451.0
  • Bit_score: 820
  • Evalue 1.00e-234
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 451.0
  • Bit_score: 831
  • Evalue 4.70e-238
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 451.0
  • Bit_score: 820
  • Evalue 3.20e-235

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium suncheonense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1365
ATGGCTATCAAATTAAAAACGTCTTTCTTCTGCCAAAGTTGCGGCACCCAATACTCCAAATGGCAAGGCCAGTGCAATGCCTGTAAAGAGTGGAACACCATAGTGGAGGAAATCATACAAAAGGAAGAAAAAACAGCCTGGAAAGCCAGTTCCACGGAAGTAAAAAGAGCCTCCAAACCGCTAAAAATAAAAGAGATCGATTCGGCCGAAGAAATACGGATGGACACCACAGACGGCGAGCTGAACCGCGTTTTAGGCGGCGGTCTGGTTCCCGGCTCCCTGACCCTTTTGGGCGGAGAACCCGGAATCGGAAAAAGTACATTACTACTGCAGATCTCTTTAAAATTACCGTATAAAACATTATACGTTTCCGGCGAGGAAAGTCAGAAGCAGATCAAAATGCGCGCAGAACGTATCACCACGAACAGCGACAACTGCTATATCCTTACCGAAACCAAAACGCAGAATATCTTTAAACAAATTGAAGCCATTGAACCGGAAATCGTAATTATCGATTCCATTCAAACGCTGCACACCGATTATATAGAATCATCGGCGGGAAGTATTTCACAGATCAGGGAATGCACCGCCGAACTGATCAAATATGCCAAAGAAACCAATGTACCGGTTATCCTTATCGGGCATATTACCAAAGACGGAAACATTGCCGGGCCAAAGATACTGGAACACATGGTAGACACCGTTTTACAATTTGAAGGCGACAGAAACCATATTTACCGTATCCTGCGTTCGCTCAAAAACCGTTTCGGTTCCACAGCCGAACTGGGAATTTATGAAATGCAGGGAAGCGGATTACGGGAAGTCGCCAATCCGTCTGAAATTCTGATCTCCCACAAGGAAGAAGAACTTTCCGGAACGGCAATTGCCACCACACTGGAAGGCATGCGACCGTTAATGATCGAAATACAGGCTTTGGTTAGCACAGCTGTTTACGGAACGCCGCAGCGAAGTACTACCGGCTATAATGCCAAACGTTTAAACATGATCCTGGCGGTACTGGAAAAACGCGCCGGATTCCGTTTGGGCGCCAAAGACGTCTTCCTGAACGTTACCGGCGGAATTTCTGTAGACGATCCGGCTATTGACCTTGCTGTTGTGGCAGCAATCTTATCGTCTAACGAAGACATTCCGGTGGGCAAAGACTTTTGTTTTGCCGGCGAGGTAGGGCTATCCGGCGAAATACGTCCGGTGAACCGTGTCGATCAGCGTATTCAGGAAGCTGAAAAATTAGGATTTGCGACCATTTTTGTTTCCAAATACAACAAGGTAACGCTTAAGAATACTATTATCAACGTCAAATTGGTGTCTAAAATTGAAGATGTTGTCAGCGAGTTATTTGGTTAA
PROTEIN sequence
Length: 455
MAIKLKTSFFCQSCGTQYSKWQGQCNACKEWNTIVEEIIQKEEKTAWKASSTEVKRASKPLKIKEIDSAEEIRMDTTDGELNRVLGGGLVPGSLTLLGGEPGIGKSTLLLQISLKLPYKTLYVSGEESQKQIKMRAERITTNSDNCYILTETKTQNIFKQIEAIEPEIVIIDSIQTLHTDYIESSAGSISQIRECTAELIKYAKETNVPVILIGHITKDGNIAGPKILEHMVDTVLQFEGDRNHIYRILRSLKNRFGSTAELGIYEMQGSGLREVANPSEILISHKEEELSGTAIATTLEGMRPLMIEIQALVSTAVYGTPQRSTTGYNAKRLNMILAVLEKRAGFRLGAKDVFLNVTGGISVDDPAIDLAVVAAILSSNEDIPVGKDFCFAGEVGLSGEIRPVNRVDQRIQEAEKLGFATIFVSKYNKVTLKNTIINVKLVSKIEDVVSELFG*