ggKbase home page

scnpilot_p_inoc_scaffold_178_curated_54

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(70971..71750)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1121899 species="Bacteria; Bacteroidetes similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 259.0
  • Bit_score: 465
  • Evalue 6.60e-128
ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 259.0
  • Bit_score: 459
  • Evalue 8.20e-127
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8XBD4_FLACA similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 259.0
  • Bit_score: 459
  • Evalue 2.60e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium suncheonense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 780
ATGGATAAGGTAAGAGCAAAAAAACATTTGGGACAACACTTTCTGAATGATGAGAATATTGCAAAAAAAATTGCAGATTCGCTGGTATTGGAAGGCTATAAAAAAGTATTGGAAATTGGTCCCGGAATGGGCGTGCTCACGAAGTATCTTTTGGAGAAACCCATAGAAACCTATGTGATCGAGATCGATACCGAGTCGGTGGAATACCTGCAAACGCATTACCTGCAGCTGAGCAACCGTATTATTTCCAAAGACTTTTTAAAATATAATATTAAAGAAGTCTTTGGCGACGAACCTTTTGCCATTATTGGTAATTTCCCGTACAATATTTCTTCACAAATCGTATTCCGCGCACTGGAACTGAGAGATCAGATTCCGGAATTTTCCGGGATGTTTCAAAAAGAAGTAGCCGAGCGTATCTGTGAAAAAAAAGGCACCAAAGCCTATGGTATACTTTCCGTACTGGTACAGGCTTTTTATGATACGGAATACCTGTTTACAGTATCGGAAAACGTTTTTACACCGCCGCCAAAAGTGAAGTCGGGAGTGATGCGCATGCGTAGAAAAGAAAACTACAAACTGCCGTGTGATGAGAAAATGTTTTTTAATGTGGTGAAAACCGCATTTAACCAACGCAGAAAAACACTGCGAAATAGCTTAAAAGTTTTTCAGCTATCGGATAATTTAAGAGAAGATAGTATCTTTGACCTCCGCCCGGAGCAAATCTCGGTAGAACAATTTATAGAACTCACTCAAAAAATAGCCGCCGATGGAGTTTAA
PROTEIN sequence
Length: 260
MDKVRAKKHLGQHFLNDENIAKKIADSLVLEGYKKVLEIGPGMGVLTKYLLEKPIETYVIEIDTESVEYLQTHYLQLSNRIISKDFLKYNIKEVFGDEPFAIIGNFPYNISSQIVFRALELRDQIPEFSGMFQKEVAERICEKKGTKAYGILSVLVQAFYDTEYLFTVSENVFTPPPKVKSGVMRMRRKENYKLPCDEKMFFNVVKTAFNQRRKTLRNSLKVFQLSDNLREDSIFDLRPEQISVEQFIELTQKIAADGV*