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scnpilot_p_inoc_scaffold_307_curated_36

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 37334..37900

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000361D706 similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 176.0
  • Bit_score: 225
  • Evalue 6.00e-56
DNA-directed RNA polymerase subunit sigma {ECO:0000313|EMBL:KGO86548.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 176.0
  • Bit_score: 225
  • Evalue 8.40e-56
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 178.0
  • Bit_score: 201
  • Evalue 2.90e-49

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Taxonomy

Flavobacterium rivuli → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGCTTTCATTGGAAACGAAACCAAACGATATCGACAATTTAATTATACGCTGCCAGAACGGAAGCCGGGGTGCCCAATTTGAAATTTACAATCGGTTTTATAAAGCGATGTACAATACGGCCTATCGTATTGTGAAGGATGAGCATTGGGCGGAAGACATTATGCAGGAATCGTTTCTGAGTGCCTTCCTGAATATGGACGCATATAAAAAGGAAGTTTCTTTTGGAGCCTGGCTTAAAAAGATTGTCGTGAACAAGAGTATCGACAATTACAAAAAGAGGCATAAAATGGCAACGGAAGCATTGCATCCGGTGTTGAATAAAGTAGAAGACATTCCGGACGATAACACGCAAATGGATTACAGCAGCCTGAAAGCACAACAGGTTATGAAAACAATTCAGTCACTGCAGGACAATTACAGGATCGCTTTAACGCTGTTTCTGATAGAAGGATATGATCAGGAAGAAATCAGCCAGATCATGGGAATAACAGAAATGAACTGCCGGACAATGATTAGCAGGGCAAAAGATAAATTACGAATAAAACTAAATGAAGCCGTAAGATGA
PROTEIN sequence
Length: 189
MLSLETKPNDIDNLIIRCQNGSRGAQFEIYNRFYKAMYNTAYRIVKDEHWAEDIMQESFLSAFLNMDAYKKEVSFGAWLKKIVVNKSIDNYKKRHKMATEALHPVLNKVEDIPDDNTQMDYSSLKAQQVMKTIQSLQDNYRIALTLFLIEGYDQEEISQIMGITEMNCRTMISRAKDKLRIKLNEAVR*