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scnpilot_p_inoc_scaffold_307_curated_100

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 103069..103854

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGX7_COLFT similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 260.0
  • Bit_score: 402
  • Evalue 3.80e-109
Contig66, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76310.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 256.0
  • Bit_score: 411
  • Evalue 8.80e-112
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 260.0
  • Bit_score: 402
  • Evalue 1.20e-109

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Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 786
ATGCTGCACCAGGAATTTGAACCACCGGAGGAACTGCGGGATATCATAAAATGTTTTTGGTATACCCAAATAGACTTTGGCGGACAGCAATCAGATTTTGAGGTAATGCCCGATGGCTATGCCGAAATAATTTTTCATTTCGGAAGTCCCTGCAGCATTTCTTCTGAGGGAAACCTGCAGCCGTTGCCATCACCGTTTATTATGGGGCTGCTCAATCAGCCGGTTATTCTAAACACAAAAGACCGCCTGGAAATCATCGGTATCCGTTGTTTTCCCTGGACAGTGTTTGACTTACTCGGACTGCCGTCCGGTAACACAGCAGTGTACCTGTTTGAACATCCTGTTGCCCGGCTTCAGTCGGAATTACATCCGTTTATCGATGCCGGCAGGATTGATGAAGCCGTGACCCGGGTAAAACAGTATTTTTTGGAGGCACGGCCGCAGGTTACTGCCAACAATCTACTATCCAAAGCAGGAGTGGCGATGAGAAGCGCCAATGGGATGCTGCCGGTTAGCGAGGTAGCAGTAGCAGCTCATGCAACGGTTCGTACGCTGGAAAGGAAATTCAAACAATCGTCCGGTTATACGGTTAAAGACGTGTCCGGTTTGATGCGTTTTGAACAGGTGCGAAACCACTTATGGCTTTATCCGGATTCGAATCTTGCCGGTTTGGCACACGAGTTCGGTTATACGGATCAATCCCATCTCAGCCGGGAATTCAAGCGCTACAGCGGTACGACGCCGGCGGCATTTGCCCGCAAAGCAAAAATGGGAAACCGCCTGTAA
PROTEIN sequence
Length: 262
MLHQEFEPPEELRDIIKCFWYTQIDFGGQQSDFEVMPDGYAEIIFHFGSPCSISSEGNLQPLPSPFIMGLLNQPVILNTKDRLEIIGIRCFPWTVFDLLGLPSGNTAVYLFEHPVARLQSELHPFIDAGRIDEAVTRVKQYFLEARPQVTANNLLSKAGVAMRSANGMLPVSEVAVAAHATVRTLERKFKQSSGYTVKDVSGLMRFEQVRNHLWLYPDSNLAGLAHEFGYTDQSHLSREFKRYSGTTPAAFARKAKMGNRL*