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scnpilot_p_inoc_scaffold_8008_curated_1

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 446..1120

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B63E08 similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 223.0
  • Bit_score: 334
  • Evalue 1.10e-88
Two component transcriptional regulator {ECO:0000313|EMBL:AHJ96818.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 223.0
  • Bit_score: 336
  • Evalue 4.00e-89
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 223.0
  • Bit_score: 287
  • Evalue 4.80e-75

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Taxonomy

Hymenobacter swuensis → Hymenobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 675
ATGAAGTTATTACTGGTTGAAGACAATCCCGAATTACGTAAAAGCATATCCGAATATTTAATTAATGAGCATTATATCTGTGAAGTTGCGTCCAATTTTGACGAAGCACGGGACAAATTAATTTTATATAGCTATGATTGTATCATACTGGATATCATGTTGCCCGACGGAAATGGCATTGATCTGCTTAAATTACTGCGTAAAGAAGGAAATGATTCCAGTGTGATTATAGTCTCTGCAAAAAATACACTGGATTTTAAAATTATCGGACTGGATGCCGGTGCCGATGATTATATAACCAAACCTTTTCCATTACCGGAACTTTTTTCAAGGATAAAAGCAGTAATGAGAAGGAAAAATAGTACGCTTTCGTCTAAGCTTGAATACAATGAAATTAGTGTTGACCTGCAATCCCTGGAAGTTTTGGTAAACGGTAAAGCCTTGTTACTCACCAAAAAAGAAACAAATCTGCTGATTTATTTTATCAATAATAAAAACCGGGTTTTATCCAGACAAACGATAGCTTCCCACCTTTGGGGCGATTATACGGATAATCTGGACAATTTCGACTTTATTTACCAGCACGTTAAGAATCTGAGAAAAAAGATTGTCGATGCCGGAGGAGAGGATTATATCAGTACGGTTTATGGTTTGGGGTATAAATTTTCACTATAG
PROTEIN sequence
Length: 225
MKLLLVEDNPELRKSISEYLINEHYICEVASNFDEARDKLILYSYDCIILDIMLPDGNGIDLLKLLRKEGNDSSVIIVSAKNTLDFKIIGLDAGADDYITKPFPLPELFSRIKAVMRRKNSTLSSKLEYNEISVDLQSLEVLVNGKALLLTKKETNLLIYFINNKNRVLSRQTIASHLWGDYTDNLDNFDFIYQHVKNLRKKIVDAGGEDYISTVYGLGYKFSL*