ggKbase home page

scnpilot_p_inoc_scaffold_23027_curated_3

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(1008..2147)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2JA46_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 372.0
  • Bit_score: 529
  • Evalue 2.30e-147
RND transporter {ECO:0000313|EMBL:KEQ31128.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 379.0
  • Bit_score: 531
  • Evalue 1.10e-147
RND family efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 370.0
  • Bit_score: 453
  • Evalue 5.00e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1140
ATGAAATATATAACAATATTGGCAGCTTCATTTATAATGCTGCTGACCGCCTGCAATAATGAAACAAAAGAAGCAGCAAAGGAAGAACCTAAAAAAGGCGGCATGCCTGGTATGGGGATGGGAATGGGAATGATGATGAACCCTTGGGAAACTGTCGAAATATCTAAGTCCAACCCGAAGGTAATGCTGAAATTAGCTGGTGAGCTAAAGCCTGACCAACAGACAGCCCTGTTTGCAAAAGTTAACAGTTATGTAAAAAGTATCCGTGTAGATATCGGTGATAAAGTATCGGCAGGTCAGATTCTGGCAGTATTGGAAGCACCTGAAATCCAGTCGCAGGTAGCAAGTGCTAAGGCGAAATTGGAAGCTCAGGAAGCCATCTATTTCTCGACCAAAGCTACTTACGACAGGACAATGAAAGCCAACGAAACACAGGGAGCTATTGCAAAAGATGCGCTTGACCAGATCAAGGCCCGTAAACTTTCCGATGAGGCTCAGTTGAATGCCGCAAGGTCTGCCTATAATGAGATCAAGGATATCAATAATTACCTGGTGATCAAAGCTCCGTTCAGCGGAACAATCACGGATAGAAACGTGGATCTGGGTGCCTATGTGGGACCAATGAACAAAGAGCCTTTGTTGGTGGTGGAGAACAATCAGAAACTACGTCTAAATCTTTCCGTTCCGGAAGCCAATACGCCTTACCTTAAATTAGGTGACACGATCCGTTTCCACGTGAGATCACAGCCCCAGCAAAAGCATATTGCTCTGGTCAGCAGAAAATCGGGAAGCCTTGACTTGAAACTCCGTTCTGAAAAGATCGAAGCCGATTTTATCAATAAGAATAATATCCTGAAACCGTATATGGTTGCTGAGACGACCATTCCTTTACAAAATACGGAACCTACATTTTTTGTTCCCAAAACCGCAGTTGTTGAAAGCGGAATGGGCGTGTATGTGATACGTGTAGAGAATGGAAAGACCAAAAATGTTCCGGTGAGCAAGGGACGTGTAATGCCGGAACAGGTAGAAGTTTTTGGAGAACTTAATCAGGGAGACAAAATATTAAAAATGGGATCGGAAGAAATTCAGGAAGCTACTGAAGTTCCGAACAAACCAAATAATCCTAATAAAAAATAA
PROTEIN sequence
Length: 380
MKYITILAASFIMLLTACNNETKEAAKEEPKKGGMPGMGMGMGMMMNPWETVEISKSNPKVMLKLAGELKPDQQTALFAKVNSYVKSIRVDIGDKVSAGQILAVLEAPEIQSQVASAKAKLEAQEAIYFSTKATYDRTMKANETQGAIAKDALDQIKARKLSDEAQLNAARSAYNEIKDINNYLVIKAPFSGTITDRNVDLGAYVGPMNKEPLLVVENNQKLRLNLSVPEANTPYLKLGDTIRFHVRSQPQQKHIALVSRKSGSLDLKLRSEKIEADFINKNNILKPYMVAETTIPLQNTEPTFFVPKTAVVESGMGVYVIRVENGKTKNVPVSKGRVMPEQVEVFGELNQGDKILKMGSEEIQEATEVPNKPNNPNKK*