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scnpilot_p_inoc_scaffold_63_curated_95

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 95975..96667

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 228.0
  • Bit_score: 388
  • Evalue 9.20e-105
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 228.0
  • Bit_score: 351
  • Evalue 2.10e-94
tRNA pseudouridine synthase B n=1 Tax=Flavobacterium rivuli RepID=UPI00037B3F87 similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 228.0
  • Bit_score: 379
  • Evalue 2.30e-102

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Taxonomy

Flavobacterium subsaxonicum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 693
TTGATTACAGCCGAAGATTTCCAAACGGGACAAGTTTTACTGATTGACAAACCTTTGCAATGGTCGTCGTTTCAAGCCGTGAATAAGATTAAATGGTCCCTGAAGAAACACCTGGGATTAAAGAAAATCAAAGTAGGACATGCCGGGACTTTAGATCCGCTGGCATCCGGTTTACTGATTGTGTGCACCGGTAAATTCACAAAGCGCATCCCGGAATTACAGGGAATGATCAAAGAATATACCGGAACTTTTCACCTGGGCGCGACAACACCTTCGTATGATCTGGAAACGGAAATCGATGCTGTTTTCCCGACCGGACACATCACCGAAGAACTGATCTACAAAACAGTAGCATCCTTTTTAGGTGAAATCGACCAGAAACCACCCATTTTTTCCGCTATTAAAAAAGACGGCAAACGATTGTATGAACATGCCCGAAAAGGCGAAGAAATAGAAATCCAGGCCCGAAAAACCGTTATCCATGAATTTGAAATTACCCGCATTGCTTTACCGGAAGTAGATTTCAGAGTGGTTTGCAGTAAAGGGACCTACATCCGTTCTCTTGCCTACGATTATGGTCTGGCTTTACAGTCGGGTGCACACTTAACCGCTTTGCGCCGTACTAAAATCGGAGATTATGCTGTTGACAATGCCATGCTGGTTACCGACTTTGAAGATTCGGTAACGCCTTAA
PROTEIN sequence
Length: 231
LITAEDFQTGQVLLIDKPLQWSSFQAVNKIKWSLKKHLGLKKIKVGHAGTLDPLASGLLIVCTGKFTKRIPELQGMIKEYTGTFHLGATTPSYDLETEIDAVFPTGHITEELIYKTVASFLGEIDQKPPIFSAIKKDGKRLYEHARKGEEIEIQARKTVIHEFEITRIALPEVDFRVVCSKGTYIRSLAYDYGLALQSGAHLTALRRTKIGDYAVDNAMLVTDFEDSVTP*