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scnpilot_p_inoc_scaffold_63_curated_101

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 101487..102950

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-54 factor n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S676_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 488.0
  • Bit_score: 873
  • Evalue 1.40e-250
RNA polymerase sigma54 factor {ECO:0000313|EMBL:KGO90445.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 488.0
  • Bit_score: 884
  • Evalue 8.60e-254
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 487.0
  • Bit_score: 827
  • Evalue 2.10e-237

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Taxonomy

Flavobacterium suncheonense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1464
ATGCTCAAACAACATTTACAACTTAAATTATCCCAAAAACTATCGCCTCAGCAAATCCAATTGATGAAGTTGATACAATTGCCTACACAGGCTTTTGAACAACGTCTTAAAGAGGAATTGGTTGAGAATCCCGCTTTGGAAACCGGTAAGGAAGAACAAATGGATGCCGATGAGTTTGCCGATGATAATTTTGACGAGTATGATGATTATGATAACGAGCGCATTGATGCTGACGAGATCAATATCGATGAATATTTAAGCAATGATGAAACGCCGGACTACAAACTTCAGGCGAATAATTACAGCGATGACGACGAAGACAGAAGCCTGCCTTTTGCCGCACCTGTAAGTTTCCATCAGGATTTAATCAACCAGCTGAATACTTTTATACTTTCCGACAGCGAAAGGGAAATTGCCGAATTCTTAGTGGGCAGCATCGACGACATGGGTTACATCCGTCGCGATATTCAGGACATTGTTGACGATATGGCGTTTACACAAGGTATTTATACCGATGATAAAAATGTGGAACGCATTCTGAACATTATCCACGAACTGGAACCATCCGGTGTTGGCGCCAGAGATTTACAGGAATGCCTGTTGTTACAGCTGCGTCACAAAACACCAACAGAAGCGATCGCACTAGCTATTGACATTCTGGAAAACCAGTTTGATGCCTTTACCAAAAAGCATTACGACAAGTTATTACAAAAATACGACATCACTCAGGAACAGCTTCGAAAAGCTATTGATGAAATCGAAAAGCTAAACCCGAAACCGGGCGGTTCTTTCGACGGCAACACCAAAGCGATCGAACATGTGGTTCCCGATTTTTCAATACGCATTGTGGAAGGTGAGTTAGAACTTTCCCTGAACGGACGAAATGCGCCTGAATTACACGTTTCCAAAGATTATCAGGAAATGCTGCAAACGTATAAAGAGTCCCGGGAAAAATCGAATTCCCAAAAAGATGCCGTACAGTTTATCAAGCAAAAACTGGATTCTGCAAAATGGTTCATTGATGCCATCAAACAGCGTAATGAAACCCTGTTTGTGACCATGAATGCCATCATGCACTATCAGGAAGAATATTTCCTTGATGGCGATGAAACCAAGTTGCGACCGATGATCTTAAAGGATATCGCCGACATGATCGGTCTGGATATTTCTACCGTTTCCCGTGTGGCAAACAGCAAATATGTAGACACTCCTTATGGCACCAAGCTAATCAAGGATTTCTTTTCGGAAGCCATGAAAAATGACCAGGGAGAAGATGTTTCGACAATTGAAATTAAAAAGATCCTTCAGAATGTCATTGAAGATGAAGACAAGAGCAAACCGTTGCCGGATGACAAGCTTGCCGAAATTTTAAAAGAAAAAGGATACCCGATAGCCCGGAGAACGATTGCCAAATACCGCGAACAGCTGGATATTCCGGTAGCCCGGATGAGAAAGAAAATATAA
PROTEIN sequence
Length: 488
MLKQHLQLKLSQKLSPQQIQLMKLIQLPTQAFEQRLKEELVENPALETGKEEQMDADEFADDNFDEYDDYDNERIDADEINIDEYLSNDETPDYKLQANNYSDDDEDRSLPFAAPVSFHQDLINQLNTFILSDSEREIAEFLVGSIDDMGYIRRDIQDIVDDMAFTQGIYTDDKNVERILNIIHELEPSGVGARDLQECLLLQLRHKTPTEAIALAIDILENQFDAFTKKHYDKLLQKYDITQEQLRKAIDEIEKLNPKPGGSFDGNTKAIEHVVPDFSIRIVEGELELSLNGRNAPELHVSKDYQEMLQTYKESREKSNSQKDAVQFIKQKLDSAKWFIDAIKQRNETLFVTMNAIMHYQEEYFLDGDETKLRPMILKDIADMIGLDISTVSRVANSKYVDTPYGTKLIKDFFSEAMKNDQGEDVSTIEIKKILQNVIEDEDKSKPLPDDKLAEILKEKGYPIARRTIAKYREQLDIPVARMRKKI*