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scnpilot_p_inoc_scaffold_63_curated_130

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 129414..130064

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, tetR family protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SZD8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 217.0
  • Bit_score: 268
  • Evalue 5.40e-69
Transcriptional regulator, tetR family protein {ECO:0000313|EMBL:ESU29770.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 217.0
  • Bit_score: 268
  • Evalue 7.60e-69
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 197.0
  • Bit_score: 225
  • Evalue 2.20e-56

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Taxonomy

Flavobacterium limnosediminis → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 651
TTGGAAACTTTTTTAGTATTAAAAGTTTCCGTTATACATTTGCCGAAATTTTTAAGAATGAAAAACGAAATTTTAGAGAAATCATCCGACATGTTTTTACGACTGGGCTTCAAAAGTGTTACGATGGATGACATAGCTGCTGAGATGGGGATTTCAAAAAAAACCATTTACGAACATTATGCCACCAAGCTGGAATTAGTAAAAGCGGCTACTTTTTTCCTGTATGAGAAAATCTCATCGGGAATAGACCATATCTGTTCGCTGGAAAAAAACCCTATCGAAGAGCTGTTTGATATTAAAGAGTATGTTCAGAATAATTTAAAAGACCCGAATTCGTCTCCAATTTTCCAATTGCAGAAATACTATCCGAAAATACACGCCTGTTTAAAAACCATGCAGTTTGAAAAAATGGACCACTGTGTTATTGACAATCTGAATCGCGGAAAAAAAGCCGGTTTGTTCCGACCTGAGATCGATGAAGAATTTATCGGGCGTATCTATTATGCCAGTGCGATGAGCATTATGGATTTTGAACTGTTCCCGGAAGAAATGTACACCCGCAATGAACTTGATGAGAAATTACTGGAATACCATGTGAGAGGCATCGCCACTCCAAAAGGAATTGAAACGTTAGAAAAATTACTTAAATAA
PROTEIN sequence
Length: 217
LETFLVLKVSVIHLPKFLRMKNEILEKSSDMFLRLGFKSVTMDDIAAEMGISKKTIYEHYATKLELVKAATFFLYEKISSGIDHICSLEKNPIEELFDIKEYVQNNLKDPNSSPIFQLQKYYPKIHACLKTMQFEKMDHCVIDNLNRGKKAGLFRPEIDEEFIGRIYYASAMSIMDFELFPEEMYTRNELDEKLLEYHVRGIATPKGIETLEKLLK*