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scnpilot_p_inoc_scaffold_63_curated_226

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(249457..250539)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 360.0
  • Bit_score: 615
  • Evalue 4.20e-173
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 360.0
  • Bit_score: 573
  • Evalue 5.40e-161
DNA polymerase IV, damage-inducible protein DinB n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6STT2_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 360.0
  • Bit_score: 615
  • Evalue 3.00e-173

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Taxonomy

Flavobacterium limnosediminis → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1083
ATGGAATCGACTCCCTATTTCCGCAAAATTATCCATGTCGATATGGATGCTTTTTATGCTTCTGTTGAGCAAATGGACAACCCTATGCTTAAAGGGAAACCTGTTGCTGTTGGTGGTAGTGAAGTGCGGGGAGTGGTTTCGGCAGCGAGTTATGAAGCCCGGAAATTTGGTGTTCGGAGTGCAATGAGCGGCTATCTTGCCAAGAAGAATTGCCCGGAACTCATTTTTGTCCGGCCCCGTTTTGACCGCTATAAAGAGATCTCTAAAAAAATCCGTGCTATTTTTCATGATTATACGGATCTGGTGGAGCCACTTTCGCTGGATGAAGCCTATCTGGATGTTACCGAGAACAAAAAAGGAAATCCCAGTGCGACATTAATTGCCAAAGAAATCCGGAAACGGATTTTTGATGAAGTGGGCCTGACCGCTTCGGCTGGAATTTCCATTAATAAATTTGTGGCAAAAGTAGCCAGCGACATTAATAAACCAAACGGACAAAAAACCATCAACCCGGAAGAAGTGGAGCAATTTCTGGAAGAACTGGATATTAAAAAATTCTACGGAATTGGTAAGGTCACGGCGGAAAAAATGTATCAGAGCGGAATCTTTACCGGCAAGGATTTAAAAGCAAAATCGGTGGAATATTTAGAAGAACATTTTGGAAAAAGCGGCGTGCATTATTACAGCATTGTCAGGGGTATTCACAACAGTTCGGTAAAACCCAACCGGACGTTGAAATCGGTTGGTGCTGAAAGAACCTTTAACATCAATCTCTCTTCGGAAATCTTTATGGAAGAGAAGCTGGAAAACATTGCAAAAGAACTGGATAAGCGAATGAAGCCTCAAAAAATAGCCGGCAAAACCGTTACGCTTAAAATTAAATATTCCGATTTTACGTTGCAGACAAGAAGCAAGACGCTGCCGTATTTTATTTCGGATAAAAGCCTGATTTTTGAAACGGCCAAAGAATTGCTCTATCAGGAAAAAATGAAAGATTCGGTGCGTTTGCTCGGAATTTCTTTAGGAAACCTGAATACGGAAATAAAGAAAGCCGTTGTAGTACAGTTAAAATTTGATTTCTAA
PROTEIN sequence
Length: 361
MESTPYFRKIIHVDMDAFYASVEQMDNPMLKGKPVAVGGSEVRGVVSAASYEARKFGVRSAMSGYLAKKNCPELIFVRPRFDRYKEISKKIRAIFHDYTDLVEPLSLDEAYLDVTENKKGNPSATLIAKEIRKRIFDEVGLTASAGISINKFVAKVASDINKPNGQKTINPEEVEQFLEELDIKKFYGIGKVTAEKMYQSGIFTGKDLKAKSVEYLEEHFGKSGVHYYSIVRGIHNSSVKPNRTLKSVGAERTFNINLSSEIFMEEKLENIAKELDKRMKPQKIAGKTVTLKIKYSDFTLQTRSKTLPYFISDKSLIFETAKELLYQEKMKDSVRLLGISLGNLNTEIKKAVVVQLKFDF*