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scnpilot_p_inoc_scaffold_168_curated_42

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(40659..41789)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FCY2_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 377.0
  • Bit_score: 400
  • Evalue 2.10e-108
Strain DSM 12611 Contig13, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51757.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 376.0
  • Bit_score: 405
  • Evalue 6.90e-110
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 377.0
  • Bit_score: 400
  • Evalue 6.50e-109

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Taxonomy

Flavobacterium hibernum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1131
ATGAAACACTATATCCTGATTTTCACCTACCTCTTTTTACTCACCGGTTGCAGTAACAAAAAAGAGACTCCGGAAACCGCTGCCGGAAAAACAGTTCCTACTGTGGTTTCCCTGACTGCCACACAAATAAAAAATGCCGGAATCGCATCCGCTTTACCGGTCGTACAGGATGTTCAGGGATCTTTATTGCTCCAGGGTTCGGTGAGCGTTCCGCCGCAAAGTACCGTAAGCCTTAGCTTCCCGTTGGGCGGCTATCTGAAACACACTGCGATGTTACCCGGTATGTACGTTCGAAAAGGCCAGGTTCTGGCTACTATGGAAGACATACAGTTCATACAGCTGCAACAGGATTTTTTAACGGCAAAAGAGCGTTTTCTTTTAGCCGATAAGGAATACAAACGTCAGAAAGGACTGAATGAAAGTAAAGCCAGCAGTGATAAAGTTGCCGAACAGGCACATACCGAAAGACAAACCCAGCAGATCGATATGGCTTCGCTTGCGCAGAAATTACGCCTGATTGGTATCAATCCGGAAAAGCTGAATGCTGCCTCTATTTCCAAAACGGTGGCTATTGTTTCCCCGATTACCGGTTTAGTGGCAAAAGTAAATGTCAATGTGGGCAAATATACTGCTCCCACCGATGTGCTGTTTGAACTGGTGGATACAAAGGACCTGCTTCTGACGCTGAATGTTTTTGAAAAAAATGTGGATCAGGTCAGCATTGGTCAGACCGTTATGGCGTATTCGAACAATGACCGCAATAAAAAATACAAAGCCAGCATACAGTATATCAATACGACACTCAACTCCGATGGCGCGATGGAACTGATTTGTAAGTTCGAGAAGATCGATGCGGCTTTATTACCGGGATTGTTTATGCAGGGCGAAGTTGCCGTCCGGAACAACAAAGGTCTTTCCGTTCCGGAAGATGCCGTTGTCCGCTGGCAGAACCGTTACTATGTCTTTACCGAGCAAAAAGAAGGTACTTATACAATGATACCGGTCGATTTGGGAAATGCCCATAACGGAATCCAGCAGATTATAGCTTCCTCAATACAAACAAACTCAAAAATAGTCGTTAAAAATGCCTATACCTTATTGACAAAATTAATGAACAGTACCGAAGAATAA
PROTEIN sequence
Length: 377
MKHYILIFTYLFLLTGCSNKKETPETAAGKTVPTVVSLTATQIKNAGIASALPVVQDVQGSLLLQGSVSVPPQSTVSLSFPLGGYLKHTAMLPGMYVRKGQVLATMEDIQFIQLQQDFLTAKERFLLADKEYKRQKGLNESKASSDKVAEQAHTERQTQQIDMASLAQKLRLIGINPEKLNAASISKTVAIVSPITGLVAKVNVNVGKYTAPTDVLFELVDTKDLLLTLNVFEKNVDQVSIGQTVMAYSNNDRNKKYKASIQYINTTLNSDGAMELICKFEKIDAALLPGLFMQGEVAVRNNKGLSVPEDAVVRWQNRYYVFTEQKEGTYTMIPVDLGNAHNGIQQIIASSIQTNSKIVVKNAYTLLTKLMNSTEE*