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scnpilot_p_inoc_scaffold_2806_curated_7

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(4972..5466)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S7V3_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 164.0
  • Bit_score: 318
  • Evalue 4.50e-84
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ESU22494.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 164.0
  • Bit_score: 318
  • Evalue 6.40e-84
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 164.0
  • Bit_score: 275
  • Evalue 8.10e-72

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Taxonomy

Flavobacterium saliperosum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 495
ATGAATTCGAGTTTAGAGCAATCTTTTGTTTCCCAATTGGAAGAACATCAGAATATTATACACAAGATTTGTCGGCTGTATACTTCTGATGAGGATTCGCACAAAGATTTGTTTCAGGAAATCACGATTCAGTTATGGAAAGCTTTCCCGCAATTTCGCGGAGAAGCAAAATTTACTACATGGGCCTACCGGGTCGCTTTGAATACAGCGATTACATTATACCGCAAAAAGACAAAAACGGTTAATACTATCGAATTTGACAATAAAATACACCGATTTAATCACGAGGATTACAATTTTGAGGAAGAAGAGCAGATTAAATTATTGTATAAAGCGGTACATCAATTAAATGATATTGAAAAAGCCTTAGTCTTTATGTATCTGGAAGACAAGGATTATACGGAGATTGCCGAAACCCTGGGAATCAGCGAAGTAAATGCCCGGGTAAAGATGAACCGTATTAAAGGAAAATTAAAAAAAATTGTAAATCCATAA
PROTEIN sequence
Length: 165
MNSSLEQSFVSQLEEHQNIIHKICRLYTSDEDSHKDLFQEITIQLWKAFPQFRGEAKFTTWAYRVALNTAITLYRKKTKTVNTIEFDNKIHRFNHEDYNFEEEEQIKLLYKAVHQLNDIEKALVFMYLEDKDYTEIAETLGISEVNARVKMNRIKGKLKKIVNP*