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scnpilot_p_inoc_scaffold_87_curated_28

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 26487..27698

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 402.0
  • Bit_score: 723
  • Evalue 1.20e-205
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 401.0
  • Bit_score: 688
  • Evalue 1.70e-195
diaminopimelate decarboxylase n=1 Tax=Flavobacterium rivuli RepID=UPI00038082A7 similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 402.0
  • Bit_score: 720
  • Evalue 9.70e-205

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Taxonomy

Flavobacterium beibuense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1212
ATGCAAATCAATCATTTACTTTCAGTAGCGGAAGAATTTGGCAGTCCTGTTTATGTATACGACGCCGACAAAATTCAATCACAGTACCAACGTTTAACCAATGCTTTTTCCAAGGTGGAAAGCCTGCGCATCAATTATGCAGTCAAGGCATTGTCAAACCTATCTGTTCTTAAGCTACTGAAGAAGATGGGGTCCGGACTTGACACTGTATCCATTCAGGAGGTGCAGTTAGGTCTACTTGCAGGCTTTTCTCCGGAAACGATCATCTATACACCAAACGGTGTTTCGATGGAAGAAATTGAAGAAGTAGCACAATTAGGCGTTCAGATAAATATTGACAATCTATCCATTTTAGAACAATTCGGCGCGAAGCATCCAACCACTCCGGTTTGTATCCGTATCAATCCACACGTAATGGCGGGTGGTAATTCGAATATTTCTGTAGGCCATATCGACAGTAAATTCGGTATTTCGATACATCAGATTCCACATTTGCTCCGCATCATCGAGAATACACAGATGCACATTAACGGAATCCACATGCATACCGGTTCGGATATTCTGGATATCGAAGTATTCCTTTATGCCGCCGAAATATTATTTGAAACGGCAAAACACTTTAAAGAACTGGATTTCATCGACTTTGGAAGCGGTTTTAAAGTACCTTATAAAAAAGACGATATCGAAACCAATGTAGAAGAATTGGGTAAAAAACTAACCAAAAGATTCAATGCCTTTTGTAAAGAATACGGCAAAGAGCTGACACTTGCTTTCGAACCGGGTAAATTTCTGGTTAGTGAAGCCGGTTATTTCCTGGCCAAAGTAAATGTGGTCAAACAAACCACATCTACTGTATTTGCAGGAATAGACAGTGGTTTCAACCACCTTATCCGCCCGATGTTCTACGGTTCACAGCACCATATCGAGAACATCACCAACCCGAAAGGAAAAGAGCGTTTCTATTCGGTTGTGGGATATATCTGCGAAACGGATACTTTTGGCAGCAACCGGAAAATTGCCGAAATTAAAGAGGGCGATATCCTGTGTTTCCGCAATGCCGGAGCCTACTGTTTCTCTATGGCATCCAACTATAATTCCCGCGTGCGCCCTGCCGAAGTACTGTGGTATAACGGAAAAGCACACCTCATCAGAGAGCGTGAAACCTTTGAAGACATCATCAGAAATCAGGTAGTACTCGAGTTTGAATACTAA
PROTEIN sequence
Length: 404
MQINHLLSVAEEFGSPVYVYDADKIQSQYQRLTNAFSKVESLRINYAVKALSNLSVLKLLKKMGSGLDTVSIQEVQLGLLAGFSPETIIYTPNGVSMEEIEEVAQLGVQINIDNLSILEQFGAKHPTTPVCIRINPHVMAGGNSNISVGHIDSKFGISIHQIPHLLRIIENTQMHINGIHMHTGSDILDIEVFLYAAEILFETAKHFKELDFIDFGSGFKVPYKKDDIETNVEELGKKLTKRFNAFCKEYGKELTLAFEPGKFLVSEAGYFLAKVNVVKQTTSTVFAGIDSGFNHLIRPMFYGSQHHIENITNPKGKERFYSVVGYICETDTFGSNRKIAEIKEGDILCFRNAGAYCFSMASNYNSRVRPAEVLWYNGKAHLIRERETFEDIIRNQVVLEFEY*