ggKbase home page

scnpilot_p_inoc_scaffold_87_curated_30

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 29391..30743

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54-like two-component response regulator n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SNH8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 450.0
  • Bit_score: 740
  • Evalue 1.30e-210
Sigma-54-like two-component response regulator {ECO:0000313|EMBL:ESU28248.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 450.0
  • Bit_score: 740
  • Evalue 1.90e-210
atoC; sigma-54-like two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 452.0
  • Bit_score: 643
  • Evalue 6.90e-182

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium limnosediminis → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1353
TTGAAAAAAATACTGATTATAGACGATGAAGAAAAACTGCGTTCCTTAATGGCGCGTATTGTTGGTTTGGAAAATTTTGAAGTCTTTCAGGCCGGCGACTGTAAAACAGGCTTAAAAAAACTGGAACAGAACAGTATCGACATTGTACTGTGTGACGTTAAATTACCCGATGGCAACGGCGTTGAACTAACCCGGCAGATTAAGGAAAAATACCCGCACATCGAAGTTATCCTGCTCACTGCCTACGGCAATATTCCCGATGGCGTACAGGCCATTAAAAACGGAGCATTCGATTATATTGTAAAAGGCGACGACAACAACAAGATCATTCCGTTGCTGCATCGTGCGATAGAAAAGAGCAACCTTACCCGGAGAGTGGCACAACTGGAAGCCCAGCTGGAAACCCGATTTTCCTTTGAAGGAATCATCGGTACCTCCAAAATGCTGCAACAGGCGATCGAACTGGCAAAAAAAGTGGCGGTAACCGATACCACGGTACTATTAACCGGCGAAACCGGAACCGGAAAAGAAGTTTTTGCACAGGCAATCCACCAGTCCAGCAACCGGAAAAACAAAAACTTTGTGGCGATAAACTGTTCTGCTTTTAGCCATGACCTGTTGGAAAGCGAAATGTTCGGTCATATCAGCGGTGCTTTTACCGGTGCGACAAAAGACAAAAAAGGATTGTTTGAAGAAGCGAATAACGGTACCATCTTTTTAGATGAAATTGGCGAAATGCCACTGGACCTGCAGGCGAAATTACTCCGTGTTATCGAAAACGGCGAATTTATTAAAGTAGGCGAAAGCAAGGTCACCAAAGTCGACGTCCGTATTATTGCTGCTACCAACAGAGATCTGTTAAAAGAAATCGAAACCGGTCATTTCCGTCAGGACTTATATTACCGCCTGTCCGTTTTCCAGATACAGTTACCGTCTTTAAAAGAGCGCACTTCCGATATTGCATTGTTAGCCAGCCATTTTTTAGCGATTTTCAGCCTGAAAATGAATAAGAAAATAAAAACACTATCCGACGACTTTATCAGTCTTTTAAAACTGCACAACTGGCCGGGCAACATCCGCGAACTGAAAAACGTACTGGAACGCAGTGTTATCCTGGAAACCGGCGACACACTCACCCGCAGCAGCCTGCCCATAGAAATACAGCAATTACAGGAAGACGGTCAAACCGGAGCACTTCCGATACTTTCTGCTTTTTCGCTGGCTTCCGCCGAAAAAATTCACATACAGAAGGTACTCAACTATACTAACGGAAACAAAACCGAGACGGCACGTTTATTAAATATAGCACTGACCACACTGTACCGGAAGCTGGACGAATACAAAATATCCTGA
PROTEIN sequence
Length: 451
LKKILIIDDEEKLRSLMARIVGLENFEVFQAGDCKTGLKKLEQNSIDIVLCDVKLPDGNGVELTRQIKEKYPHIEVILLTAYGNIPDGVQAIKNGAFDYIVKGDDNNKIIPLLHRAIEKSNLTRRVAQLEAQLETRFSFEGIIGTSKMLQQAIELAKKVAVTDTTVLLTGETGTGKEVFAQAIHQSSNRKNKNFVAINCSAFSHDLLESEMFGHISGAFTGATKDKKGLFEEANNGTIFLDEIGEMPLDLQAKLLRVIENGEFIKVGESKVTKVDVRIIAATNRDLLKEIETGHFRQDLYYRLSVFQIQLPSLKERTSDIALLASHFLAIFSLKMNKKIKTLSDDFISLLKLHNWPGNIRELKNVLERSVILETGDTLTRSSLPIEIQQLQEDGQTGALPILSAFSLASAEKIHIQKVLNYTNGNKTETARLLNIALTTLYRKLDEYKIS*