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scnpilot_p_inoc_scaffold_87_curated_136

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(136399..138399)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 665.0
  • Bit_score: 1171
  • Evalue 0.0
ligA; DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 666.0
  • Bit_score: 1081
  • Evalue 0.0
LigA protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SPU6_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 665.0
  • Bit_score: 1171
  • Evalue 0.0

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Taxonomy

Flavobacterium limnosediminis → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2001
ATGGACGTTTTACAAACTATTCAGGCTCTCAGAGAGGAGTTAAATAAACACAATTATAACTATTATGTTTTGGATAACCCTACAATCTCTGACTACGAGTTTGATGTAAAACTAAAGGAACTCCAGGAGCTTGAAGCAAAACATCCGGAATATTCCGATGAAAATTCTCCGACACAGCGTGTGGGCGGGGCGATTACCAAAAATTTCGAAACCGTATTGCACGAATCCCGTATGTATTCGCTGGATAACTCGTATTCCAAAGAAGACTTACTGGATTGGGAAAAAAGAGCCCAGAAAATATTGGGTGACGTACCTTTGGAGTACACCTGCGAGCTAAAATACGACGGTGCTTCAATTAGTATTACCTACGAAAACGGAAAGCTGAAACGCGCGGTAACCCGCGGTGACGGATTCCAGGGTGATGATGTGACGAACAACGTTAAAACCATAAAAGCGGTTCCGATTCAGCTAAAAGGAGACTTTCCTCCGAAATTCGATATCAGGGGGGAAATTATCCTGCCTTTTGCCGGATTTGAAAAAATGAACCAGGAACTGATCGAAATAGGCGAATCGCCCTATTCAAATCCCAGAAACACGGCTTCAGGCAGTTTAAAACTACAGGACAGCTCGGAAGTGGCAAAACGACCGCTGGACTGCTTGCTGTACTCACTAATTGGTTCCAACCTGCCGTTTGCTTCCCAGTTTGAAGGACTGGAAAAAGCCCGTCAATGGGGGTTTAAAGTCCCGAAACAGGCGCAGCTGGCTAAAAGTATGGACGACGTTTTTGCGTTTATTGATTATTGGGACATCCACAGACATGACCTGCCGTATGAAACGGACGGTGTGGTAGTAAAAATAAACAGCCTGCAGTATCAGGATGAGCTGGGCTATACGGCCAAATCGCCGCGCTGGGCAATTGCCTATAAATTTAAAGCCGAACAGGTTGCAACACGATTGCTGTCTATTGCCTACCAGGTGGGAAGAACCGGAGCCATTACTCCGGTGGCAAACCTCGAACCGGTACAACTGGCAGGAACCATAGTGAAAAGAGCATCCTTGCACAATGCCGACCAGATCCAGAAACTCGATATCCGGGTGGGTGATGAAGTTTTTGTGGAAAAAGGAGGCGAAATAATCCCTAAAATCATAGCGGTTGATCTGGACAAACGTCCGCAGGATTCAGAACCGACAATTTATATTCATAGCTGTCCCGAATGTGAAACGGAATTAGTACGGAAAGAAGGAGAAGCGCAGCATTATTGTCCGAATTTCTACGGCTGCCCGCCGCAGATTATTGGGCGTATCCAGCATTATATTTCCCGAAAAGCCATGGATATTGAAGGTTTGGGAGGAGAAACAGTTGCCTTGCTGTTTAATAACGGCCTGGTGAAAAACTATGCGGATTTGTACGAACTGAAAAAGGAACAGATCATTCCTTTGGAGCGTATGGCAGAAAAATCGGCAGACAACCTGATTAACGGTATCGAAAAATCAAAAGAAGTTTCCTTTGAACGAGTGCTGTTTGCTTTGGGGATTCGTTATGTTGGCGAAACGGTTGCCAAAAAACTGGCAAAACACTATAAATCGATAGATGCGATAGCTAAGGCTACGCTGATGGATTTGGTGCTGGTGGATGAAATCGGGGAGAAAATAGCACAAAGTGTTGTGGAATTCTTTGAAAACACGGAAAACAGCATCACTATTGAGCGATTACGGGGATTTGGGGTGCAGCTGGAAATAGGTGCGCATCACGATACGACCGTTTCGGATCTGCTGGCCGGAAAAACATTTGTGGTTTCGGGTGTTTTTGAAAAATTTTCCAGAGATGATCTGAAAAAAGCGATTGAAGACAACGGCGGAAAAGTGGGCAGTTCGATCTCTAAAAAAACCGATTATGTTATTGCGGGTGAAAATATGGGGCCGGCAAAACTGGAAAAAGCCAGCCAGTTGAATATAAAGATTATCAGTGAGGACGACTTTATTGCGATGCTCAACGGTTAG
PROTEIN sequence
Length: 667
MDVLQTIQALREELNKHNYNYYVLDNPTISDYEFDVKLKELQELEAKHPEYSDENSPTQRVGGAITKNFETVLHESRMYSLDNSYSKEDLLDWEKRAQKILGDVPLEYTCELKYDGASISITYENGKLKRAVTRGDGFQGDDVTNNVKTIKAVPIQLKGDFPPKFDIRGEIILPFAGFEKMNQELIEIGESPYSNPRNTASGSLKLQDSSEVAKRPLDCLLYSLIGSNLPFASQFEGLEKARQWGFKVPKQAQLAKSMDDVFAFIDYWDIHRHDLPYETDGVVVKINSLQYQDELGYTAKSPRWAIAYKFKAEQVATRLLSIAYQVGRTGAITPVANLEPVQLAGTIVKRASLHNADQIQKLDIRVGDEVFVEKGGEIIPKIIAVDLDKRPQDSEPTIYIHSCPECETELVRKEGEAQHYCPNFYGCPPQIIGRIQHYISRKAMDIEGLGGETVALLFNNGLVKNYADLYELKKEQIIPLERMAEKSADNLINGIEKSKEVSFERVLFALGIRYVGETVAKKLAKHYKSIDAIAKATLMDLVLVDEIGEKIAQSVVEFFENTENSITIERLRGFGVQLEIGAHHDTTVSDLLAGKTFVVSGVFEKFSRDDLKKAIEDNGGKVGSSISKKTDYVIAGENMGPAKLEKASQLNIKIISEDDFIAMLNG*