ggKbase home page

scnpilot_p_inoc_scaffold_87_curated_139

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(139530..139826)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Flavobacterium rivuli RepID=UPI00035CBBB6 similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 98.0
  • Bit_score: 196
  • Evalue 1.20e-47
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 98.0
  • Bit_score: 198
  • Evalue 5.80e-48
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 98.0
  • Bit_score: 193
  • Evalue 2.40e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium beibuense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 297
ATGTCAAGTATTGAGCAATCTGCAAAAGGAAAAAAAGACGGAGATATCAGATATCTAACGCCTTTAAATATAGAAACTAACAAAACTAAAAAGTATTGTCGTTTCAAAAAATCTGGAATCAAATATATCGATTATAAAGATCCGGACTTTTTATTAAAATTCGTTAATGAGCAAGGAAAAATCCTTCCTCGTCGTTTAACAGGAACTTCTTTGAAATACCAAAGAAAAGTATCTGTAGCTGTGAAAAGAGCACGTCATTTAGCATTAATGCCATATGTGGCTGATTTATTAAAATAA
PROTEIN sequence
Length: 99
MSSIEQSAKGKKDGDIRYLTPLNIETNKTKKYCRFKKSGIKYIDYKDPDFLLKFVNEQGKILPRRLTGTSLKYQRKVSVAVKRARHLALMPYVADLLK*