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scnpilot_p_inoc_scaffold_1491_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1491_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..510
DNA (510bp) protein (170aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLM1_9BURK
scnpilot_p_inoc_scaffold_1491_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(585..1199)
DNA (615bp) protein (205aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase Q5W_3105 {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K09019 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
Putative NADH dehydrogenase/NAD(P)H nitroreductase Q5W_3105 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLM2_9BURK
scnpilot_p_inoc_scaffold_1491_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1199..1507)
DNA (309bp) protein (103aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLM3_9BURK
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EIK90113.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
stress responsive alpha-beta barrel domain-containing protein
scnpilot_p_inoc_scaffold_1491_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1517..1822)
DNA (306bp) protein (102aa)
Ycii-related protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLM4_9BURK
Ycii-related protein {ECO:0000313|EMBL:EIK90114.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K09780 hypothetical protein
scnpilot_p_inoc_scaffold_1491_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1827..3146)
DNA (1320bp) protein (440aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLM5_9BURK
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EIK90115.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TRAP C4-dicarboxylate transporter permease DctM
scnpilot_p_inoc_scaffold_1491_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3139..3699)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLM6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90116.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TRAP transporter DctM-like membrane protein
scnpilot_p_inoc_scaffold_1491_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3709..4806)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLM7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90117.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1491_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4843..5673)
DNA (831bp) protein (277aa)
Catechol 1,2-dioxygenase {ECO:0000313|EMBL:EIK90118.1}; EC=1.13.11.1 {ECO:0000313|EMBL:EIK90118.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
catechol 1,2-dioxygenase (EC:1.13.11.1); K04098 hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
Catechol 1,2-dioxygenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLM8_9BURK
scnpilot_p_inoc_scaffold_1491_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5820..6755
DNA (936bp) protein (312aa)
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLM9_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK90119.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_1491_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6780..7046
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLN0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90120.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1491_curated_11
unknown

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7080..8726
DNA (1647bp) protein (549aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1491_curated_12
unknown

Not on your lists

comp(8700..8894)
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1491_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9027..10580
DNA (1554bp) protein (518aa)
Hydro-lyase, fe-s type, tartrate/fumarate subfamily, alpha subunit {ECO:0000313|EMBL:EIK90127.1}; EC=4.2.1.2 {ECO:0000313|EMBL:EIK90127.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Hydro-lyase, fe-s type, tartrate/fumarate subfamily, alpha subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLN7_9BURK
fumarate hydratase
scnpilot_p_inoc_scaffold_1491_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10577..11392
DNA (816bp) protein (272aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3]
Glutamate racemase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLN8_9BURK
scnpilot_p_inoc_scaffold_1491_curated_15
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11383..12684)
DNA (1302bp) protein (434aa)
Major facilitator superfamily MFS_1 id=1266383 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
major facilitator transporter; K06902 MFS transporter, UMF1 family
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_1491_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12684..13307)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNM1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90811.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1491_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13548..14849)
DNA (1302bp) protein (434aa)
Large permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNM0_9BURK
Large permease {ECO:0000313|EMBL:EIK90810.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
dctQ; large permease
scnpilot_p_inoc_scaffold_1491_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14839..15345)
DNA (507bp) protein (169aa)
Small permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNL9_9BURK
Small permease {ECO:0000313|EMBL:EIK90809.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
dctM; small permease
scnpilot_p_inoc_scaffold_1491_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15345..16376)
DNA (1032bp) protein (344aa)
Periplasmic protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNL8_9BURK
Periplasmic protein {ECO:0000313|EMBL:EIK90808.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
dctP; periplasmic protein
scnpilot_p_inoc_scaffold_1491_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16491..17408
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNL5_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK90805.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_1491_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17456..18091)
DNA (636bp) protein (212aa)
Regulatory protein, TetR n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNL4_9BURK
Regulatory protein, TetR {ECO:0000313|EMBL:EIK90804.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
regulatory protein, TetR
scnpilot_p_inoc_scaffold_1491_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18197..19852
DNA (1656bp) protein (552aa)
feruloyl-CoA synthase; K12508 feruloyl-CoA synthase [EC:6.2.1.34]
Feruloyl-CoA synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNL3_9BURK
Feruloyl-CoA synthase {ECO:0000313|EMBL:EIK90803.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Displaying 22 items

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