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scnpilot_p_inoc_scaffold_2235_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2235_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1746
DNA (1746bp) protein (582aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
valS; valyl-tRNA ligase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPK0_9BURK
scnpilot_p_inoc_scaffold_2235_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1824..2882)
DNA (1059bp) protein (353aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EIK91139.1}; EC=1.1.1.- {ECO:0000313|EMBL:EIK91139.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
D-3-phosphoglycerate dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPJ9_9BURK
scnpilot_p_inoc_scaffold_2235_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2882..3112)
DNA (231bp) protein (77aa)
SirA-like protein {ECO:0000313|EMBL:EIK91138.1}; EC=2.8.1.- {ECO:0000313|EMBL:EIK91138.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
SirA-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPJ8_9BURK
SirA-like protein
scnpilot_p_inoc_scaffold_2235_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3146..3691)
DNA (546bp) protein (182aa)
NUDIX hydrolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPJ7_9BURK
NUDIX hydrolase {ECO:0000313|EMBL:EIK91137.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
NUDIX hydrolase
scnpilot_p_inoc_scaffold_2235_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3696..4598)
DNA (903bp) protein (301aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cysM; O-acetylserine (Thiol)-lyase; K12339 cysteine synthase B [EC:2.5.1.47]
Cysteine synthase B n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPJ6_9BURK
scnpilot_p_inoc_scaffold_2235_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4780..5700)
DNA (921bp) protein (307aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPJ5_9BURK
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIK91135.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
nucleoside-diphosphate-sugar epimerase-like protein
scnpilot_p_inoc_scaffold_2235_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5789..6820
DNA (1032bp) protein (344aa)
oxidoreductase fad/NAD(P)-binding domain-containing protein; K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1]
CDP-6-deoxy-delta-3,4-glucoseen reductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPJ4_9BURK
CDP-6-deoxy-delta-3,4-glucoseen reductase {ECO:0000313|EMBL:EIK91134.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_2235_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6848..7810
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPJ3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91133.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2235_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7872..8471)
DNA (600bp) protein (200aa)
Electron transport protein SCO1/SenC n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPJ2_9BURK
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:EIK91132.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
electron transport protein SCO1/SenC; K07152
scnpilot_p_inoc_scaffold_2235_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8465..9367)
DNA (903bp) protein (301aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Protoheme IX farnesyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPJ1_9BURK
scnpilot_p_inoc_scaffold_2235_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9364..10485)
DNA (1122bp) protein (374aa)
Cytochrome oxidase assembly n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPJ0_9BURK
Cytochrome oxidase assembly {ECO:0000313|EMBL:EIK91130.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15
scnpilot_p_inoc_scaffold_2235_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10490..11185)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPI9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91129.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2235_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11166..11903)
DNA (738bp) protein (246aa)
Putative transmembrane cytochrome oxidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPI8_9BURK
Putative transmembrane cytochrome oxidase {ECO:0000313|EMBL:EIK91128.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative transmembrane cytochrome oxidase
scnpilot_p_inoc_scaffold_2235_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11958..12203
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPI7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91127.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2235_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12280..13161)
DNA (882bp) protein (294aa)
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:EIK91126.1}; EC=1.9.3.1 {ECO:0000313|EMBL:EIK91126.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Cytochrome c oxidase subunit III n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPI6_9BURK
scnpilot_p_inoc_scaffold_2235_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13228..13428)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPI5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91125.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2235_curated_17
unknown

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comp(13434..13511)
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 17 items

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